Protein AARS2

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
YOR335C	pdb,3hxv,A,#1	10	460	3.81e-128	45.474
YOR335C	pdb,3hxx,A,#1	10	460	3.81e-128	45.474
YOR335C	pdb,3hxu,A,#1	10	460	3.81e-128	45.474
YOR335C	pdb,3hy1,A,#1	10	460	1.61e-127	45.259
YOR335C	pdb,3hxz,A,#1	10	460	2.55e-127	45.259
YOR335C	pdb,3hxz,C,#1	10	460	2.55e-127	45.259
YOR335C	pdb,3hy0,A,#1	10	460	2.55e-127	45.259
ENSOANP00000001841	pdb,3hxv,A,#1	4	452	3.69e-127	47.323
ENSOANP00000001841	pdb,3hxx,A,#1	4	452	3.69e-127	47.323
ENSOANP00000001841	pdb,3hxu,A,#1	4	452	3.69e-127	47.323
ENSOANP00000001841	pdb,3hy0,A,#1	4	452	1.78e-126	47.109

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.032	0.073	0.896	0.051	0.522	0.426

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.398368883312422	0.202007528230866	0.0213299874529486	0.0125470514429109	0.00313676286072773	0	0.000627352572145546	0.36198243412798

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

2.612730467 0.295440590 2.216783705 0.058867463 0.000771684 5.941554914 0.421948335 0.166408535 0.009451483 5.641721062 0.000000133 0.000038507 0.035797434 0.017100932 0.050880963 0.000000133 0.057724306 0.235769551 0.221994084 5.576790216 8.255975245 0.000000133 0.000423659 0.029063213 0.082814102 0.057646812 8.192474268 0.090469878 0.000000133 0.015526130 0.007276486 0.027704518 0.035608440 0.218886612 0.240098082 8.349590241 0.000000133 0.004488171 0.011590377 0.000000169 0.065955000 0.364948417 0.137184522 0.004593480 6.724477058 0.000000133 0.009090281 0.003921132 0.037144180 0.050439268 0.472915609 0.002579791 0.097126431 0.004372232 5.246925904 0.000000133 0.001792093 0.010820150 0.000300855 0.132940902 0.139969773 0.044358179 0.138047814 0.176007780 0.000826574 6.368560124 0.000000133 0.020408458 0.019958960 0.017219784 0.051407338 0.076161387 0.044180256 0.136746907 0.147484303 0.045502632 0.001270498 8.894137870 0.000000133 0.000000001 0.000000001 0.000000028 0.399633087 0.000134909 0.103842550 0.000000002 0.000298810 0.000195534 0.000244680 0.000002041 30.237289985 0.000000133 0.197506111 0.000410907 0.916549843 0.000002035 0.220504304 0.000006421 0.000000001 0.000000001 0.000000002 0.117436085 0.047222165 2.276806495 27.536057181 0.000000133 0.000000001 0.000000001 0.000000001 0.000003828 1.744108388 1.086948288 0.397142527 0.260579093 0.000000220 0.000004509 0.000852442 0.019459506 50.515507779 113.505168989 0.000000133 0.567280698 0.001091611 1.504241410 0.367120717 0.000003051 0.922902795 0.000000001 0.000000001 0.000000002 1.871160976 0.008033198 0.043397838 7.359883993 0.436306293 209.365031748 0.000000133 0.440711542 0.000000001 0.000036885 0.079005228 1.125819151 0.010827619 0.707653671 0.599603831 0.002031263 0.000000001 0.000000002 0.000000005 0.000000373 0.000000063 276.665879709 146.176174987 0.000000133 0.210663822 0.712454283 0.006330073 0.030002801 0.394639156 1.419022368 1.493183538 0.000811477 1.302577249 0.000125780 2.004537417 6.836133537 1.520182449 282.545015121 24.028536383 0.008509291 0.000000251 0.000000133 0.000000001 0.000000001 0.310303757 0.000008468 0.740788177 0.000085128 0.000001918 0.000001481 0.234900631 0.000839393 0.000078666 0.000000364 15.072734815 80.242063040 0.000754114 0.000001875 0.000000251 310.586440686 0.000749132 0.128875000 0.082847000 0.079678700 0.107110000 0.083699500 0.100324000 0.075178300 0.086276300 0.088156000 0.086740800 0.048750200 0.021998400 0.005641040 0.001580580 0.000563351 0.000311429 0.000398768 0.000414313 0.000708154