Protein AASS

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
YNR050C	pdb,1e5q,D,#1	3	446	0	63.839
YNR050C	pdb,1e5q,C,#1	3	446	0	63.839
YNR050C	pdb,1e5q,F,#1	3	446	0	63.839
YNR050C	pdb,1e5l,B,#1	3	446	0	63.839
YNR050C	pdb,1e5q,A,#1	3	446	0	63.839
YNR050C	pdb,2axq,A,#1	2	446	0	100
YNR050C	pdb,1e5l,A,#1	3	446	0	63.839
YNR050C	pdb,1e5q,B,#1	3	446	0	63.839
YNR050C	pdb,1e5q,G,#1	3	446	0	63.839
ENSPFOP00000002602	pdb,1e5q,G,#1	411	845	6.77e-112	42.76
ENSPFOP00000002602	pdb,1e5q,F,#1	411	845	6.77e-112	42.76

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.038	0.084	0.878	0.112	0.483	0.405

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.636675235646958	0.157669237360754	0.000856898029134533	0	0.000856898029134533	0.00171379605826907	0.00342759211653813	0.198800342759212

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.943345819 0.000000618 1.936905651 0.000000016 0.000001892 5.404554069 0.000000016 0.182722080 0.005036151 7.691151030 0.000000016 0.001166364 0.065323800 0.123144592 0.005552431 0.000000016 0.246528837 0.037731484 0.059147827 9.675528322 12.050493311 0.000000016 0.000009281 0.001757834 0.000655978 0.002264269 10.180198753 0.006781579 0.000000016 0.000000014 0.034531480 0.000911979 0.301870923 0.302521581 0.008434946 8.552432759 0.000000016 0.003534117 0.002117518 0.000153306 0.176085000 0.140422082 0.266689808 0.002495061 7.941564080 0.000000016 0.000000001 0.000164795 0.000000001 0.102831930 0.090215927 0.223510250 0.134394133 0.027978955 7.003771760 0.000000016 0.000000296 0.005532973 0.000000001 0.282971696 0.001635603 0.095701936 0.069185331 0.000629894 0.000003235 6.193427139 0.000000016 0.012536486 0.016593350 0.000000001 0.133967517 0.000195526 0.191188663 0.056295401 0.001724357 0.000662369 0.000001995 7.883788471 0.000000016 0.000005998 0.031232413 0.000000001 0.031909606 0.150787122 0.334900238 0.000686759 0.093821031 0.151207516 0.000000001 0.000000002 17.784256078 0.000000016 0.000000001 0.000000001 0.000000001 0.000001768 0.000000179 0.000004052 0.432142138 0.312451190 0.000056768 0.489612058 0.000000016 0.000007749 49.382169228 0.000000016 0.058131295 0.000000001 0.000000001 0.000001577 0.000000082 0.000000095 0.009026001 0.021877441 1.601671733 0.005133554 0.000693770 0.015944301 26.246679443 11.176947913 0.000000016 0.000000001 0.500012443 0.000052365 0.000154110 0.000000002 0.000000121 0.000003578 2.143275515 0.000202012 0.000077548 0.000212521 0.002017885 0.006491017 0.363038944 292.348494786 0.000000016 0.000000001 0.000000001 0.000000001 0.000000001 1.686703179 0.000000001 0.092295703 0.476628972 0.000000199 0.000000019 0.000000010 1.480261396 0.009585605 0.004846161 0.002176797 0.935329012 0.000000016 0.000000001 0.102363177 0.000234441 0.906019415 0.000000002 0.000000039 0.000000001 0.000000424 0.000000064 0.000000376 0.000000018 0.000016603 22.052587688 15.315923312 0.284825703 654.780241535 683.137856048 0.000000016 0.000000001 0.000000001 0.000000001 0.000000010 0.000030787 0.240409327 0.326921247 0.004611138 0.000002496 0.000001362 0.000021082 2.183813584 0.110025570 32.017657647 141.048238998 310.535646939 256.851805640 451.056249008 0.006247200 0.184866000 0.104478000 0.074684400 0.086315700 0.061604200 0.074903500 0.071474400 0.077852800 0.072380000 0.080506800 0.058465800 0.030237700 0.009053450 0.001749950 0.001219760 0.000851139 0.000561020 0.000850415 0.001697900