Protein ABCB8

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSRNOP00000000529	pdb,2ixf,B,#1	465	719	0	98.824
ENSRNOP00000000529	pdb,2ixf,A,#1	465	719	0	98.824
ENSRNOP00000000529	pdb,4k8o,A,#1	469	722	4.38e-180	98.819
ENSRNOP00000000529	pdb,2ixe,A,#1	469	719	1.56e-179	99.203
ENSRNOP00000000529	pdb,2ixg,A,#1	467	720	1.73e-179	98.425
ENSRNOP00000000529	pdb,2ixf,C,#1	469	720	6.11e-179	98.81
ENSRBIP00000029692	pdb,1jj7,A,#1	552	802	2.37e-173	97.61
MGP_PahariEiJ_P0043712	pdb,2ixf,B,#1	464	718	1.22e-167	92.549
MGP_PahariEiJ_P0043712	pdb,2ixf,A,#1	464	718	1.22e-167	92.549
ENSSBOP00000021338	pdb,1jj7,A,#1	492	742	2.19e-167	95.219
MGP_PahariEiJ_P0043712	pdb,2ixe,A,#1	468	718	2.87e-167	93.227

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.093	0.234	0.673	0.009	0.412	0.579

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.214077467721783	0.0583090379008746	0.0304039983340275	0.0187421907538526	0.0108288213244481	0.00999583506872137	0.00624739691795085	0.651395251978342

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

2.518929785 0.000000346 2.121253523 0.140368177 0.061211157 3.646392268 0.399223830 0.228149164 0.089785869 4.301863657 0.000000039 0.080284965 0.201576404 0.523006375 0.195252531 0.915845246 0.337338186 0.401533078 0.420217055 5.307573190 6.809625694 0.000000039 0.059624448 0.105896517 0.316052167 0.321923704 8.200270853 0.211548948 0.153926357 0.041034691 0.073978754 0.258733671 0.347251491 0.464757875 0.431767818 9.491564543 0.000000284 0.034371602 0.047863189 0.020959506 0.180971867 0.368350282 0.556763773 0.152988176 7.654978794 0.183758535 0.039441035 0.020586319 0.091769479 0.126952724 0.584492471 0.422845014 0.402408870 0.158287028 6.984631708 0.103780147 0.051735736 0.030275371 0.075159969 0.097485168 0.322701156 0.233671988 0.376667193 0.304459255 0.291507067 7.570814770 0.000149176 0.033825037 0.001675204 0.024597646 0.107680437 0.205125370 0.113231757 0.279373904 0.166822728 0.496878629 0.572458880 9.484258477 0.094386714 0.034590952 0.012919097 0.052798332 0.071418792 0.062166983 0.023421131 0.001954351 0.402841183 0.316761648 0.269153460 0.058665185 18.251258758 0.000005354 0.100500583 0.010864439 0.147667226 0.174747652 0.162008478 0.459683190 0.203516739 0.001803385 0.020389346 1.408838736 0.583187613 1.207498250 28.396816396 0.000000039 0.024757372 0.000015914 0.241887706 0.594635053 1.217207972 0.023954462 0.225119179 0.185281186 0.237140817 0.523316010 0.310743544 3.020888076 3.791497146 26.195125365 0.000000039 0.032483051 0.014772121 0.618466052 0.140510166 0.257638772 0.511898070 0.126144570 0.000375220 1.552732993 1.263664662 0.323634326 0.001328038 0.022569357 18.332021066 147.796343925 0.000000039 0.199913317 0.000060871 0.403910645 0.670044565 0.998918191 0.030135945 0.272495541 0.085409977 1.604968836 0.018853474 1.457775247 1.558075131 0.000007931 2.764176859 11.672174111 62.759345529 0.000000039 0.000074781 0.363216964 0.000153286 0.207156129 0.008235434 0.002528635 0.265791979 0.894101199 0.326265899 0.000039665 1.134344807 0.748494833 5.388410392 0.235410215 61.039035031 0.319279627 79.932344013 0.000000039 0.000304559 0.096538077 0.266528161 0.708230214 0.067284820 0.030203900 0.000008872 0.000047229 0.090475062 0.432876467 1.254663679 3.112757230 2.541473348 6.013752559 0.783736489 9.775877741 17.978154238 70.672621743 0.002581910 0.174197000 0.120020000 0.084328800 0.093055900 0.062395500 0.083437900 0.058923900 0.061727800 0.059941600 0.059302600 0.054442000 0.045858700 0.024161300 0.005715300 0.002457280 0.001760200 0.001123330 0.001457580 0.003111790