Protein AK3

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSGGOP00000027189	pdb,2ar7,A,#1	4	223	1.24e-166	100
ENSGGOP00000027189	pdb,2ar7,B,#1	4	223	1.24e-166	100
ENSGGOP00000027189	pdb,2bbw,B,#1	4	223	1.53e-166	100
ENSGGOP00000027189	pdb,2bbw,A,#1	4	223	1.53e-166	100
ENSECAP00000016009	pdb,2ar7,B,#1	4	222	7.21e-158	94.064
ENSECAP00000016009	pdb,2ar7,A,#1	4	222	7.21e-158	94.064
ENSECAP00000016009	pdb,2bbw,A,#1	4	222	9.15e-158	94.064
ENSECAP00000016009	pdb,2bbw,B,#1	4	222	9.15e-158	94.064
ENSMPUP00000000719	pdb,2ar7,B,#1	55	274	1.36e-157	94.545
ENSMPUP00000000719	pdb,2ar7,A,#1	55	274	1.36e-157	94.545
ENSMPUP00000000719	pdb,2bbw,A,#1	55	274	1.48e-157	94.545

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.155	0.4	0.445	0.276	0.219	0.505

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.363945578231293	0.0153061224489796	0	0.00170068027210884	0	0.00510204081632653	0.00170068027210884	0.612244897959184

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

2.457714863 0.181213348 4.338947947 0.280720362 0.344281258 3.938020755 0.459791528 0.219601592 1.357902362 6.681222173 1.087147982 0.289044628 0.030806232 0.460692483 0.248800109 1.541404421 0.849679881 0.890576755 1.683532490 3.468841477 6.002972264 0.177546560 0.000013283 0.124573563 0.272464389 0.695397256 3.839704363 0.711756505 0.273685369 0.099553123 0.000031180 0.089869796 0.320495845 0.672809346 1.123418832 4.385239893 0.000000005 0.000101286 0.073001219 0.000008650 0.142487672 0.643387110 1.799687921 0.656053322 3.626055154 0.000000005 0.000000041 0.092141232 0.027394697 0.181792286 0.688327108 0.731881890 0.562972343 0.952012616 5.109753453 0.000000022 0.512503975 0.000047639 0.000596300 0.000000050 0.566073273 0.910182261 0.232669589 0.877629380 0.515945863 4.889022305 0.318532103 0.295217552 0.249582085 0.000000027 0.504771652 0.000015236 0.288287814 0.479941057 0.261784251 1.467184307 1.813032639 8.346257411 0.000000005 0.007090639 0.000455067 0.379539161 0.000000146 0.020797743 0.075489262 1.511409535 0.762097191 1.297420632 2.487256133 1.965994175 7.961353826 0.000000005 0.000000001 0.246161738 0.015749323 0.292558742 0.423178892 0.429880154 0.178606995 0.368879292 0.000975542 0.941153424 0.526188539 0.060762704 9.434200593 0.000000005 0.000000001 0.000000029 0.000000057 0.538318506 1.909894302 0.000002687 0.001998653 0.034182763 0.000007967 1.044827970 0.011302357 0.477273522 5.276770833 7.976322770 0.000000018 0.000000006 0.000000021 0.000000008 0.000000016 1.179194151 2.579589312 0.941610175 0.000000190 1.867717506 0.001564948 0.006634828 3.806392620 0.000006331 0.000000264 6.288087873 0.000000005 0.000000001 0.000000002 0.599198274 0.000000003 0.000000045 1.334662900 0.000000350 0.632523498 0.907085937 1.411627255 1.911998969 3.449002918 0.000001308 0.000000003 0.000000056 0.000000089 0.000000005 0.000000004 0.000000010 1.180631589 0.000000090 0.000000482 0.000000033 0.000002054 0.000006827 0.000000350 0.000005988 1.742881022 2.155897105 0.001255757 0.000000171 0.061110513 0.000001259 0.000000341 0.000000046 0.016141385 0.000000014 0.000000119 0.000000237 0.000350128 0.688351523 0.004546121 2.428418263 3.769007253 0.000373360 3.885612485 2.051786411 0.000068618 0.000006389 43.730643354 0.000011508 0.000014360 110.892165294 0.018621200 0.116363000 0.061017200 0.065359000 0.069860500 0.062915000 0.108306000 0.079126800 0.073496400 0.078844900 0.070955700 0.063653800 0.037183500 0.026758600 0.029065900 0.011152500 0.006698710 0.009125800 0.005639650 0.005856240