Protein AK4

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSCJAP00000048323	pdb,2ar7,B,#1	4	223	1.35e-165	99.091
ENSCJAP00000048323	pdb,2ar7,A,#1	4	223	1.35e-165	99.091
ENSCJAP00000048323	pdb,2bbw,B,#1	4	223	1.46e-165	99.091
ENSCJAP00000048323	pdb,2bbw,A,#1	4	223	1.46e-165	99.091
ENSSSCP00000027309	pdb,2ak3,A,#1	2	227	1.85e-160	94.69
ENSSSCP00000027309	pdb,2ak3,B,#1	2	221	2.01e-157	95.455
ENSTBEP00000006962	pdb,2ak3,A,#1	2	227	3.4e-157	90.708
ENSOCUP00000009813	pdb,2ak3,A,#1	2	227	1.7e-156	91.593
ENSPCOP00000024471	pdb,2ak3,A,#1	2	227	2.17e-156	90.708
ENSPVAP00000014857	pdb,2ak3,A,#1	2	227	5.96e-155	90.265
ENSOCUP00000008621	pdb,2bbw,B,#1	4	223	7.46e-155	91.818

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.107	0.489	0.404	0.242	0.416	0.343

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.262877442273535	0.133214920071048	0.00177619893428064	0.00177619893428064	0.00355239786856128	0	0	0.596802841918295

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

1.629088832 0.001052560 2.907244962 0.036426936 0.567027259 3.690250200 0.034108202 0.312376879 0.665183699 5.462699432 0.298409457 0.157972320 0.190557590 0.552961542 1.243127153 0.454287515 0.620546192 0.583091170 1.125125820 3.339503457 5.285273979 0.091269794 0.112435809 0.071479789 0.100060307 0.626192719 3.962999609 1.301214703 0.308874605 0.250822487 0.013353906 0.338408073 0.577611899 0.611895756 0.759185451 3.535661141 0.158358702 0.068595542 0.081061799 0.214307614 0.085584370 0.717781903 0.877721528 0.526158764 4.380596482 0.000001629 0.165674406 0.204805475 0.024624709 0.334734132 0.291970941 1.026050828 0.506513749 0.963266902 4.825355889 0.005930376 0.098733858 0.051364060 0.190378675 0.001931662 0.566473449 0.556578710 0.024937556 0.840997055 0.494095281 3.985011306 0.000012647 0.091895510 0.037614296 0.291156156 0.120872419 0.473067673 0.487365962 0.543984551 0.677538650 0.313980958 1.742769863 5.304056398 0.000000320 0.030393986 0.000106236 0.008000561 0.000032426 0.000058760 0.366624249 0.782182750 0.651957391 0.891774423 1.231244497 1.468019262 10.211297645 0.000000123 0.043063661 0.005414196 0.138235107 0.000084721 0.197508596 0.472930378 0.249951060 0.306106043 0.454583102 0.575048881 0.528852746 1.592039216 9.151283187 0.000000330 0.000000365 0.000007947 0.390120093 0.000024867 0.831014424 0.665830110 0.000142305 0.782478607 0.000179263 0.815219353 0.497678291 1.813661947 2.542310489 4.791129410 0.000000190 0.000000041 0.180262286 0.000000528 0.170983172 0.000068286 0.772448013 0.331753038 0.010552191 0.737468081 0.576608653 0.678015238 0.617801204 0.222863792 0.559329725 5.715034513 0.000000005 0.000001658 0.000000001 0.000000003 0.213815708 0.000000369 0.331420308 0.336139203 0.082749411 0.381816421 0.451300522 0.711047891 1.983991275 0.000000971 0.000000169 2.471116548 6.813855444 0.000000077 0.000035684 0.412489916 0.000008079 0.015669688 0.000012575 0.000012836 1.345120539 0.952850656 0.080349161 0.712836567 1.752189178 0.460575373 4.526628950 0.000031459 0.013749776 3.234415847 1.627244324 0.000006203 0.000498235 0.093153758 0.001949603 0.002196647 0.319597920 0.002449505 0.883645933 1.155666395 0.339737970 0.999583877 1.694819523 4.085026320 2.965348520 1.843868173 10.364424817 0.000609278 6.128674582 25.402425279 0.018559700 0.118786000 0.066690600 0.069146400 0.064558400 0.068523600 0.090450100 0.067940900 0.064437800 0.078479600 0.072574700 0.072059000 0.043370100 0.023932600 0.027105300 0.010054200 0.010863600 0.014403000 0.007364100 0.010700300