Protein ALDH1L2

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSETEP00000008987	pdb,3rhp,A,#1	426	922	0	65.863
ENSGMOP00000002269	pdb,3rhl,A,#1	434	920	0	69.388
ENSTRUP00000020956	pdb,4gnz,D,#1	426	923	0	78.715
ENSDARP00000093667	pdb,3rhp,D,#1	418	915	0	80.321
ENSLACP00000004726	pdb,2o2q,C,#1	426	924	0	72.6
ENSFALP00000014031	pdb,3rhm,A,#1	418	914	0	78.715
ENSACAP00000015573	pdb,3rhl,B,#1	427	924	0	78.715
ENSPVAP00000016645	pdb,3rhq,B,#1	426	923	0	75.301
ENSVPAP00000010221	pdb,4go2,D,#1	406	903	0	70.281
ENSMOCP00000006989	pdb,2o2r,D,#1	426	923	0	78.514
ENSLAFP00000011860	pdb,3rho,D,#1	426	923	0	78.313

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.214	0.369	0.418	0.384	0.476	0.14

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.684210526315789	0.0666118421052632	0.00246710526315789	0	0.0230263157894737	0.00411184210526316	0.0131578947368421	0.206414473684211

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.410512316 0.049392176 1.510912476 0.043672410 0.502713620 4.950014239 0.458351393 0.789895403 1.293899804 3.239825718 0.009439310 0.248145133 0.565068411 1.260846078 1.648164514 0.856476322 1.206039763 1.800734032 2.201689570 4.683106689 5.201237395 0.017022822 0.012523962 0.308063485 0.822090308 0.991048265 7.185548853 3.039592411 0.000053357 0.000937430 0.088428419 0.436222491 0.524934668 2.863319576 1.538296625 6.299640819 0.000000861 0.001163072 0.024247297 0.051814464 0.355168154 1.031157876 1.412135619 2.253397224 9.778543779 0.000000030 0.000871335 0.000269355 0.315082239 0.692887077 0.703382240 0.962855395 0.236486103 3.523290845 10.438984137 0.000000009 0.002363759 0.000029040 0.062212909 0.272510002 0.260164860 1.000532187 0.000843278 0.867227445 2.842894554 9.857973448 0.000000005 0.000000016 0.011723008 0.001086873 0.336921630 0.456628796 1.045165236 0.704662467 0.699918535 0.647397602 1.967367767 10.244981046 0.000000008 0.005930587 0.052331849 0.073050907 0.793176916 0.399111071 1.270626959 0.172611403 0.002485369 0.311723407 0.000585379 1.857209376 7.480050331 0.000000576 0.000023372 0.000010732 0.000001856 0.853134533 1.266818601 1.557868984 0.270685364 0.000028331 0.002105770 0.295913652 0.108476944 1.218998360 6.079566609 0.000000505 0.000000210 0.001545767 0.606643160 0.105207591 0.898030145 0.595795474 0.003704737 0.352283729 1.143866702 1.658074101 0.443401309 0.014575372 0.994348240 7.628485757 0.000000364 0.000000039 0.000000530 0.000000684 0.004529454 0.683058189 0.841199059 0.053515397 0.002748953 0.884150333 0.391451308 0.075337340 1.880075561 2.819953929 7.443974888 9.783689353 0.000000002 0.000000016 0.000001064 0.321520090 0.001399958 0.000008816 0.400882774 0.000036054 2.483589213 0.002147149 0.443427703 0.481953705 0.814761623 1.427149879 0.000002697 0.000629872 11.986666434 0.000000133 0.000000112 0.000003285 0.319380809 0.834990640 0.819833099 1.673751978 0.906815528 0.000027013 0.000007449 0.000001028 0.000000329 0.000014391 2.791018790 0.000022138 0.000118367 3.972974626 9.986335187 0.009756290 0.000000654 0.003222397 0.882519611 0.002157786 2.083862458 0.519522545 0.356797691 0.740736606 2.040437416 0.820170674 1.844717756 0.039734694 2.148907817 0.000023592 0.049401578 0.000050704 0.000001839 15.349891923 0.077522400 0.196564000 0.087434900 0.064975100 0.105231000 0.052917600 0.079295500 0.049334400 0.057325100 0.058653600 0.041330300 0.041019500 0.030915300 0.014933400 0.010672000 0.008374530 0.011444800 0.004237160 0.002262270 0.005556540