Protein ALDH5A1

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSPSIP00000005250	pdb,3jz4,C,#1	31	446	0	59.375
ENSSSCP00000046295	pdb,3ek1,B,#1	57	531	0	55.765
ENSACAP00000002590	pdb,3jz4,C,#1	41	516	0	58.787
ENSPFOP00000014983	pdb,2w8q,A,#1	43	520	0	71.25
ENSSHAP00000006940	pdb,3ek1,H,#1	60	535	0	55.975
ENSMICP00000025742	pdb,3jz4,B,#1	54	529	0	56.904
ENSFALP00000014128	pdb,3jz4,D,#1	1	419	0	59.905
ENSSTOP00000018321	pdb,3ek1,C,#1	1	472	0	55.274
ENSAMXP00000016077	pdb,2w8n,A,#1	35	423	0	70.844
ENSPVAP00000014815	pdb,3jz4,A,#1	50	538	0	54.99
ENSPPAP00000025067	pdb,3jz4,B,#1	58	546	0	54.379

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.103	0.363	0.534	0.139	0.512	0.349

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.300704225352113	0.204225352112676	0.0528169014084507	0.0204225352112676	0.00704225352112676	0.0190140845070423	0.00633802816901408	0.38943661971831

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.671783236 0.029795158 1.658914166 0.002258979 0.103752598 4.730488045 0.158827672 0.320603254 0.336577491 3.955455303 0.021043184 0.058721983 0.373199240 0.307870337 0.341779634 0.375521152 0.407872802 0.338521004 0.923189622 5.528342489 6.915129506 0.000000048 0.043555778 0.094910289 0.262785531 0.281348345 7.122078136 1.055606745 0.000000005 0.022931965 0.125235629 0.193652798 0.386284106 1.971345997 0.623238633 6.411603895 0.000000026 0.033653266 0.061385318 0.126150571 0.223768103 0.490785273 0.645986632 0.599981344 6.544156858 0.000000005 0.017443295 0.153547857 0.069953986 0.170149362 0.520285030 0.341843331 0.316318784 0.474868869 7.179191755 0.000000005 0.027368321 0.057546793 0.036310373 0.143690017 0.054859030 0.297454453 0.308074365 0.217343689 0.149840194 7.422440143 0.000000005 0.033233983 0.032076108 0.100092628 0.103571980 0.371844387 0.460227078 0.008571843 0.442984584 0.674771664 1.037960560 8.303990509 0.000000005 0.000000221 0.175964189 0.058600072 0.059050801 0.076985083 0.461159140 0.000190321 0.004053504 0.085488065 0.410260866 0.117635355 13.787775017 0.000000005 0.032343516 0.128234029 0.000005301 0.455050620 0.313886963 0.136063361 0.000691357 0.237815551 0.155294234 0.384672853 0.294440740 0.010102240 12.862535893 0.000000005 0.006698250 0.031629042 0.001201610 0.168034685 0.000017148 0.166125921 0.009986998 0.430341439 0.214826309 0.341865919 0.209949859 0.827596858 3.749989068 8.273904779 0.000000005 0.000000001 0.000023268 0.044035637 0.264843147 0.000015424 0.957853749 0.278067261 0.000006253 0.281160596 0.000000423 0.251766631 0.838783321 1.799626860 12.273651976 4.224231727 0.000000005 0.042698384 0.000000005 0.000000020 0.086283561 0.565595974 0.869415462 0.032497794 0.000358390 0.138746125 0.145069334 0.723169285 1.470440252 0.646753976 1.727919695 5.105077753 11.334190709 0.000000005 0.076744732 0.007284895 0.220019021 0.000944949 0.000032474 0.520077782 0.000000519 0.134544422 0.000161173 0.612778902 0.000004407 0.373327514 0.044431399 0.001912220 3.441352712 8.871225781 72.457581350 0.000000005 0.002921993 0.113743447 0.197656655 0.319023017 0.000796436 0.443512645 0.001922091 0.000153840 0.262808389 0.819742155 0.114719547 2.209816692 0.064141779 1.075771705 2.104111738 0.000012854 1.009059017 29.558990905 0.020449900 0.178996000 0.087213200 0.076651100 0.110135000 0.072834500 0.084543700 0.069683500 0.066383800 0.066831200 0.061571800 0.046189600 0.022339500 0.013721400 0.004192990 0.006883950 0.002262720 0.002129370 0.001915380 0.005071400