Protein ATAD3A

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSACAP00000010010	pdb,1xwi,A,#1	92	281	2.95e-12	27.692
ENSACAP00000010010	pdb,3eih,B,#1	89	281	4.78e-12	27.411
ENSACAP00000010010	pdb,3eih,A,#1	89	281	5.51e-12	27.411
ENSLACP00000021784	pdb,3h4m,A,#1	341	528	6.89e-12	30.256
ENSLACP00000021784	pdb,3h4m,B,#1	341	528	6.89e-12	30.256
ENSLACP00000021784	pdb,3h4m,C,#1	341	528	6.89e-12	30.256
ENSCINP00000014509	pdb,3h4m,A,#1	347	535	7.07e-12	28.358
ENSCINP00000014509	pdb,3h4m,B,#1	347	535	7.07e-12	28.358
ENSCINP00000014509	pdb,3h4m,C,#1	347	535	7.07e-12	28.358
ENSAMXP00000008896	pdb,1xwi,A,#1	23	212	7.28e-12	27.179
ENSGACP00000001429	pdb,3h4m,A,#1	341	528	7.46e-12	30.256

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.035	0.054	0.911	0.255	0.508	0.236

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.349101229895932	0.181646168401135	0.021759697256386	0.0160832544938505	0.0264900662251656	0.0179754020813623	0.0075685903500473	0.379375591296121

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.000007507 0.000372550 2.416126159 0.249405857 0.000000001 7.315538727 0.012809176 0.000394695 0.007298456 7.025502842 4.423564560 0.052033089 0.058196706 0.000072869 0.020188257 0.398787692 0.166066976 0.129393000 0.888222605 6.431613985 7.454165417 32.023990932 0.000000001 0.000022160 0.011740179 0.000903431 7.704504967 0.003884801 0.856947687 0.000000001 0.071715938 0.007224284 0.200659879 0.443250020 0.133088973 5.816927712 0.886185697 0.000000001 0.000000002 0.000053923 0.066614632 0.009707097 0.005912762 0.001349615 5.386058486 6.733607573 0.000001496 0.000000002 0.000001452 0.024728424 0.105096176 0.444548370 0.000034976 0.019581172 3.626626026 19.576930872 0.000009319 0.000001822 0.000023155 0.001937181 0.141585197 0.263223532 0.016020187 0.050546974 0.000267551 5.236102538 46.562826066 0.000000001 0.266269777 0.056280921 0.000007266 0.160201626 0.126339150 0.022062829 0.085057126 0.323465975 0.004219649 9.010893876 1.173386280 0.000000001 0.000000002 0.000000002 0.000000001 0.000000043 0.024167978 0.071068042 0.354794521 0.394739916 0.292149516 0.008063908 19.004994108 28.892258496 0.192139425 0.000000002 0.000000002 0.000000001 0.400082662 0.000000001 0.129858046 0.000000011 0.000000794 0.000029263 0.000000023 0.993244522 41.692844390 700.973599466 0.000000001 0.002315822 0.001877558 0.000131383 0.280602140 0.337493442 6.591991907 2.658632080 2.250820013 1.531019011 0.275122826 5.151288517 55.883532482 6.744647435 3364.390430651 0.000000001 0.000000002 0.000000002 0.000000001 0.365917271 0.000020177 3.327160151 0.000064135 0.053192771 2.281128008 1.275052884 7.431911010 0.010654141 128.489030173 4.461846322 0.000007507 0.000000001 0.000000002 0.000000002 0.000687289 0.000001490 2.879253297 0.000000001 0.000000001 0.000000001 4.124295549 0.000043704 7.795845976 14.564373026 0.000000025 0.000000970 0.000000093 5.100002252 0.000000001 1.518875546 0.414167182 0.002038403 0.007070595 0.000007419 2.021465334 0.104545808 0.003577977 1.259690137 1.084137279 0.000111134 0.000003304 0.000000025 0.465395111 0.001500815 0.000000257 578.893834871 0.628087655 0.000187076 0.000149405 2.070043296 0.000858873 0.000280146 0.100262119 0.304968425 0.759835357 0.267866151 1.832530553 0.535471601 0.000031170 0.001693248 0.050696184 173.246312903 0.000000257 140.173944318 0.000013322 0.097578100 0.052978600 0.054331200 0.085712700 0.080326900 0.086920800 0.089959000 0.102930000 0.124998000 0.099314900 0.064338900 0.032758600 0.018202500 0.003966790 0.001429220 0.001079440 0.000389796 0.001223380 0.001547580