Protein ATP5H

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSOARP00000012213	pdb,2cly,E,#1	4	124	4.72e-83	98.347
ENSOARP00000012213	pdb,2cly,B,#1	5	124	3.43e-82	98.333
ENSMLUP00000009679	pdb,2cly,E,#1	4	124	4.53e-78	91.736
ENSSTOP00000027984	pdb,2cly,E,#1	4	124	6.09e-78	90.083
ENSCAFP00000038678	pdb,2cly,E,#1	4	124	1.05e-77	90.909
ENSMLUP00000009679	pdb,2cly,B,#1	5	124	3.56e-77	91.667
ENSSTOP00000027984	pdb,2cly,B,#1	5	124	5.89e-77	90
ENSCAFP00000038678	pdb,2cly,B,#1	5	124	1.19e-76	90.833
ENSTTRP00000002456	pdb,2cly,E,#1	4	124	3.93e-74	88.43
ENSSSCP00000049868	pdb,2cly,E,#1	13	133	7.34e-74	86.777
ENSTTRP00000002456	pdb,2cly,B,#1	5	124	2.92e-73	88.333

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.108	0.179	0.713	0.219	0.152	0.629

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.331081081081081	0.0292792792792793	0	0.00225225225225225	0	0	0	0.637387387387387

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

18.174218837 0.276325753 2.381894272 0.670224063 0.146831255 5.640472968 2.559916046 0.019229007 0.181612407 6.970513768 2.885994663 0.213851701 0.035328501 0.014474254 0.322430138 17.952046036 0.183101182 0.530646257 0.534937672 4.784688134 8.038109064 0.566938174 0.215194639 0.202663307 0.072760215 0.441790884 10.774087453 0.440111676 0.205333871 0.079779404 0.279784328 0.274935794 0.036304942 1.611529399 0.416519500 5.950943161 9.610725008 0.081846211 0.102189952 0.038136607 0.085403966 0.008078382 0.363883020 0.222479888 4.462831190 0.165859001 0.040011417 0.070819788 0.000219334 0.022921157 0.133060600 0.161900603 0.433499692 0.657700466 3.761704657 0.184470699 0.000036879 0.065332163 0.006368993 0.096429541 0.188961459 0.116343702 0.450846320 0.476540623 0.198098950 4.878712699 11.622595352 0.000005515 0.007010943 0.222795801 0.011223707 0.091432222 0.050601404 0.051980224 0.512771131 0.270768658 0.197862438 5.554795270 0.228042366 0.000000010 0.152677585 0.000044473 0.000097612 0.151725151 0.302193374 0.056931388 0.036114955 0.001731779 0.107430857 0.320397625 4.732065606 0.053975592 0.000000004 0.000000369 0.000026065 0.000021240 0.314072593 0.000821345 0.000097491 0.026754570 0.195588950 0.083397970 0.277052249 0.360302752 4.026633084 1.220268542 0.000000002 0.000000033 0.048617454 0.000342150 0.222426185 0.442717331 0.000001588 0.355994363 0.058917779 0.000391504 0.127183626 0.669315268 0.253506609 0.564755302 53.412654287 0.000656940 0.000000005 0.000000004 0.046161610 0.121795438 0.000600142 0.000000012 0.000000019 0.001013957 0.116636069 0.039082132 0.000004045 0.000173173 0.325380964 5.677834999 0.000009385 0.207565568 0.000000002 0.000000002 0.110747221 0.355049397 0.006947418 0.021570967 0.128787984 0.000865609 0.126444641 0.000000001 0.000000001 0.000000002 0.000000003 0.960942669 0.000000005 0.000000278 0.000000002 0.000000002 0.000000002 0.000082969 0.000000002 0.289338488 0.161620045 0.000000002 0.000000001 0.264499003 0.000000001 0.111097838 0.000000002 0.000000003 0.000000007 0.000000005 0.000000005 0.089537418 0.000000002 0.084911694 0.009417968 0.283067652 0.022992894 0.021796152 0.053056368 0.000004307 0.104859979 0.231412438 0.000024178 0.172154294 0.107891243 0.127669137 0.419148733 0.000000005 0.000000005 0.000000012 0.000359720 0.057634800 0.061983100 0.066037600 0.066677700 0.064336400 0.062287600 0.057826800 0.054779800 0.098924300 0.100769000 0.076725600 0.069231500 0.045499800 0.029281000 0.014660500 0.018748500 0.019336000 0.008492970 0.026407100