Protein ATP5J

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSBTAP00000032359	pdb,1vzs,A,#1	33	108	5.01e-52	100
ENSDNOP00000012454	pdb,1vzs,A,#1	35	110	5e-49	93.421
ENSMPUP00000000994	pdb,1vzs,A,#1	33	108	7.25e-48	92.105
ENSSARP00000000669	pdb,1vzs,A,#1	33	108	8.64e-48	89.474
ENSFCAP00000017789	pdb,1vzs,A,#1	33	108	3.48e-47	89.474
ENSSTOP00000007739	pdb,1vzs,A,#1	33	108	4.2e-47	88.158
ENSCAFP00000034277	pdb,1vzs,A,#1	35	110	4.96e-47	90.789
ENSMLUP00000014562	pdb,1vzs,A,#1	33	108	5.4e-47	89.474
ENSECAP00000015460	pdb,1vzs,A,#1	33	107	6.83e-47	92
ENSFDAP00000006950	pdb,1vzs,A,#1	33	108	2.89e-46	85.526
ENSCPOP00000004235	pdb,1vzs,A,#1	33	108	4.07e-46	85.526

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.04	0.099	0.861	0.059	0.163	0.779

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.124807395993837	0.0416024653312789	0.00154083204930663	0.00308166409861325	0.0061633281972265	0.0061633281972265	0.00462249614791988	0.812018489984592

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.001351849 0.003539981 11.022376502 0.016211818 0.248432743 13.089762619 0.006280066 0.257300075 2.592398481 9.027336464 0.281351447 0.570468215 0.085351363 0.116856367 0.810056253 0.287315052 0.857745590 1.208420428 3.097357630 7.692408551 11.947013809 12.614959769 0.002764365 0.104310325 0.102730546 0.010507074 8.046768028 2.026555367 0.235445215 0.009292878 0.194012345 0.180818837 0.064318714 1.438654954 0.203579533 4.226088665 0.100343245 0.000227444 0.345116746 0.149185658 0.000058656 0.225255666 0.062277212 0.643869311 3.265201581 11.276731093 0.005137818 0.114829616 0.010655917 0.000325713 0.322769176 0.078044876 0.015641412 0.600690937 2.085384161 7.543766138 0.045581184 0.093629301 0.000299964 0.000288172 0.163743923 0.035531572 0.001768692 0.329515502 0.198414543 2.500281503 0.083394849 0.000000245 0.000003808 0.038793221 0.029481126 0.268198206 0.000916296 0.037536780 0.013012010 0.261070595 0.113402088 2.226710737 12.237188896 0.000179412 0.150342406 0.146314064 0.096165396 0.056727323 0.000289735 0.000033559 0.175841486 0.069562910 0.540109871 1.005867561 1.879572403 84.002994525 0.000135748 0.000007804 0.000013227 0.000009206 0.000264523 0.000065211 0.023546869 0.023632796 0.000109233 0.807116900 0.225061914 0.867225314 3.045661214 3.496550136 0.000000587 0.693486606 0.043954307 0.000060089 0.986678245 0.666263006 0.002417786 1.405238425 1.789551675 0.395597468 1.351053494 0.003509173 0.051441121 1.980417713 0.385409859 0.000000415 0.000053639 0.000107431 0.000558320 0.758668600 0.071574245 2.135656005 0.048501005 0.996184056 0.280933736 0.001394670 0.000175223 0.000017785 0.000017263 0.001456408 0.002555016 0.000000326 0.316944243 1.108918752 0.000000239 0.409942858 0.549816196 0.562841929 0.348043106 0.370642415 1.150842802 0.626957441 0.364925774 1.450983976 0.000000028 0.000003708 9.081662578 0.028235721 0.000000176 0.016936606 0.001367853 0.392121370 0.000011620 1.380203910 0.693609379 0.815387723 0.420520867 0.002344977 1.111483655 0.983071972 0.000010921 5.015956522 0.014286594 0.000000401 0.000000011 18.815823307 0.233095902 0.000000338 0.000000264 0.000000370 0.334983757 0.000054917 0.011412111 0.000051684 0.000471746 0.779519398 0.468128477 1.159960476 1.647752544 7.285511162 2.591926695 0.000004355 0.000000055 11.996896866 0.000746696 0.037709200 0.048845500 0.058065300 0.054913100 0.064488500 0.060281600 0.071268500 0.083162400 0.103251000 0.117228000 0.104984000 0.093714400 0.052521600 0.012659400 0.006168230 0.002148230 0.009127850 0.007308740 0.011407900