Protein ATP5O

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSBTAP00000024326	pdb,2wss,W,#1	24	169	5.2e-99	96.575
ENSSSCP00000012823	pdb,2wss,W,#1	24	169	1.19e-93	90.411
ENSCAFP00000014026	pdb,2wss,W,#1	36	181	1.82e-92	89.041
ENSFCAP00000017480	pdb,2wss,W,#1	24	169	1.37e-91	88.356
ENSECAP00000007141	pdb,2wss,W,#1	24	169	2.39e-91	86.301
ENSPVAP00000010548	pdb,2wss,W,#1	24	169	9.69e-90	86.986
ENSPCOP00000023500	pdb,2wss,W,#1	24	169	2.9e-89	86.986
ENSCHOP00000009936	pdb,2wss,W,#1	24	169	3.53e-89	85.616
ENSDNOP00000013436	pdb,2wss,W,#1	24	169	6.38e-89	85.616
ENSCANP00000017845	pdb,2wss,W,#1	24	169	1.08e-88	85.616
ENSTTRP00000004488	pdb,2wss,W,#1	24	169	2.65e-88	86.301

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.109	0.342	0.549	0.086	0.318	0.597

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.481203007518797	0.0476190476190476	0.0025062656641604	0	0	0	0	0.468671679197995

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.635228594 0.000000064 3.445718760 0.000000064 0.328739202 5.923268380 0.000000064 0.088279072 0.987583663 7.283296316 0.000000064 0.263014936 0.358430806 0.784109564 0.501177267 0.000000064 0.022703135 0.064433669 1.876711940 7.004659027 5.167180345 0.000000064 0.112925457 0.439220819 0.155982535 1.022100750 5.921445812 1.528416427 0.000000064 0.078642324 0.004688418 0.173361243 0.266299352 1.081546504 0.468938402 5.336715932 0.000000064 0.049522748 0.048331248 0.298080583 0.176791513 0.024892569 0.269928193 1.413590288 4.796923979 0.000000064 0.000017899 0.070649575 0.329516084 0.160478334 0.465333587 0.157449210 0.232181371 0.763845416 7.859139594 0.000000064 0.016575352 0.038172240 0.520689074 0.143943923 0.457867294 0.212397468 0.389317333 0.008798408 0.274058058 3.324992941 0.000000064 0.094250095 0.000000886 0.021563292 0.102263671 0.046876778 0.005569885 0.268458969 0.318166935 0.419289323 0.543047131 3.865056247 0.000000064 0.000000001 0.004433321 0.561739651 0.160183359 0.185537457 0.000000410 0.189402711 0.200764540 0.400442022 0.153230013 0.054434061 4.327121185 0.000000064 0.000000001 0.391814864 0.173466710 0.000013442 0.291132965 0.012545867 0.000000220 0.138205723 0.049924684 0.476432946 0.000000015 0.435079334 5.011234943 0.000000064 0.070107547 0.086999084 0.251644958 0.000000127 0.032110861 0.117221247 0.507123266 0.000002539 0.000005765 0.331322645 0.236999001 0.232456871 1.477613419 7.448454035 0.000000064 0.151252710 0.000000014 0.000001840 0.158875723 0.000000001 0.000000004 0.304823062 0.000000001 0.109751712 0.356499595 0.490463339 0.749318373 0.272942474 1.127701505 0.000028407 0.000000064 0.000000001 0.418486517 0.001876087 0.000002609 1.786925494 0.114862307 0.468136427 0.387245754 0.000007476 0.174109273 0.380164069 0.544008698 0.000000005 0.000002326 0.000000010 0.000000007 0.000000064 0.000000002 0.000008432 0.680771175 0.000469599 0.000001883 0.000002653 0.000035145 0.000126892 0.048500171 1.218155721 0.307653008 0.000000233 0.000000127 1.155452142 0.000000043 0.000000007 0.000000017 0.000000064 0.034969198 0.766995087 0.204915844 0.000015667 0.000001262 0.457544891 0.330620837 0.000000103 0.000071028 0.094719544 0.000564030 1.224146352 0.000000005 0.000390188 4.825892443 0.000000007 0.000000017 2.691166992 0.001564780 0.116228000 0.077543000 0.052812900 0.075938600 0.072418800 0.086119200 0.071680600 0.087346600 0.070901400 0.071899100 0.061656800 0.053438300 0.022207500 0.018114900 0.018306500 0.013562400 0.005863160 0.008641790 0.013755700