Protein ATP5S

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSBTAP00000020228	pdb,3e2j,B,#1	26	200	6.36e-131	100
ENSBTAP00000020228	pdb,3e2j,A,#1	26	200	6.36e-131	100
ENSBTAP00000020228	pdb,3e2j,C,#1	26	200	6.36e-131	100
ENSBTAP00000020228	pdb,3e2j,D,#1	26	200	6.36e-131	100
ENSBTAP00000020228	pdb,3e4g,A,#1	26	200	9.16e-130	99.429
ENSSSCP00000034229	pdb,3e2j,D,#1	73	247	3.71e-126	96
ENSSSCP00000034229	pdb,3e2j,A,#1	73	247	3.71e-126	96
ENSSSCP00000034229	pdb,3e2j,B,#1	73	247	3.71e-126	96
ENSSSCP00000034229	pdb,3e2j,C,#1	73	247	3.71e-126	96
ENSSSCP00000034229	pdb,3e4g,A,#1	73	247	4.24e-125	95.429
ENSP00000308334	pdb,3e2j,B,#1	41	215	1.05e-118	90.286

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.084	0.215	0.701	0	0.405	0.595

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.364583333333333	0.0458333333333333	0.00416666666666667	0.00208333333333333	0.00625	0.0479166666666667	0.0458333333333333	0.483333333333333

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.079919281 0.000000003 2.186868452 0.000000003 0.138858456 4.867414021 0.007501431 0.080664005 0.469917808 2.847291839 0.000000003 0.060383842 0.311100743 0.227680213 0.811938316 0.040098613 0.335352738 0.544942030 1.701908491 2.233081039 3.762664049 0.000000003 0.044072389 0.356434549 0.296777860 0.449529368 3.032007051 0.945725614 0.000000003 0.050771397 0.095110282 0.560088430 0.245853042 0.805001777 0.831391068 4.092372588 0.000000003 0.017789332 0.180065610 0.045937289 0.296249947 0.600060611 0.628578948 1.080821034 5.478965207 0.000000003 0.003838765 0.586914043 0.014483756 0.008517455 0.524501377 0.690121246 0.421944217 1.305614686 8.441794947 0.000000003 0.069744750 0.005899523 0.289160708 0.024942782 0.205447003 0.469395605 0.013733375 0.779333113 0.433489702 4.038931191 0.000000003 0.000236966 0.012213516 0.189201736 0.004644606 0.005542054 0.111472559 0.328217017 0.855528436 0.439361333 2.892487456 4.983195790 0.000000003 0.000653761 0.007125489 0.000177660 0.026024062 0.042190099 0.252621978 0.000097705 0.169090686 0.646893683 0.142236219 1.650459900 1.232340203 0.000000003 0.000007608 0.209341492 0.086212214 0.000002263 0.000973918 0.323418316 0.000026519 0.000041422 0.000006825 0.000561743 0.536022962 0.073055564 1.007619162 0.000000003 0.000003260 0.005071869 0.000125923 0.074653197 0.675154119 0.856327430 0.811989063 0.003371437 0.226311361 0.628297484 0.242487345 0.362772983 0.003834916 1.850069672 0.000000003 0.066275243 0.032859247 0.000308478 0.000121002 0.066256723 0.927528665 0.007020327 0.605904577 0.160896848 0.468995403 0.002166158 1.293589704 0.237626766 0.000161679 2.340670110 0.000000003 0.784929514 2.280751949 0.000171466 0.000774184 0.000299327 0.001606761 0.000570253 0.000089458 0.000583221 0.020160357 0.000419212 7.180913475 0.026873433 11.309993981 0.008450722 86.695379815 0.000000003 0.002462846 0.017726466 0.042381028 0.509535087 0.001338008 0.003937224 0.000244632 0.024506559 0.008016143 0.026284080 0.002066730 0.291070430 0.037274418 0.000029524 0.003479645 13.262795796 98.537352700 0.000000003 0.000015465 0.000348406 0.001174640 0.001741036 0.416909465 0.028032230 0.007626391 0.007663196 1.741994016 0.547178848 0.156215946 0.568627331 1.059097445 1.723852477 0.001780091 7.672954423 0.538004912 13.718993463 0.030401800 0.129246000 0.061514800 0.079701700 0.077990900 0.089752100 0.093850900 0.080318200 0.080754300 0.060732700 0.056998000 0.055849100 0.032557000 0.026564600 0.012128300 0.011326500 0.008511780 0.001087070 0.003573440 0.007140570