Protein BDH1

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSAMEP00000004489	pdb,4wk6,A,#1	26	232	4.96e-29	33.014
ENSAMEP00000004489	pdb,3rro,A,#1	26	232	9.45e-29	33.014
ENSAMEP00000004489	pdb,3rro,B,#1	26	232	9.45e-29	33.014
ENSAMEP00000004489	pdb,3tzh,C,#1	26	232	3.74e-28	33.014
ENSAMEP00000004489	pdb,3tzh,A,#1	26	232	3.97e-28	33.014
ENSAMEP00000004489	pdb,3tzh,B,#1	26	232	3.97e-28	33.014
ENSAMEP00000004489	pdb,3tzk,A,#1	26	232	7.48e-28	32.536
ENSAMEP00000004489	pdb,3tzk,B,#1	26	232	7.48e-28	32.536
ENSAMEP00000004489	pdb,3u09,A,#1	26	232	1.27e-27	32.536
ENSAMEP00000004489	pdb,3u09,B,#1	26	232	1.27e-27	32.536
ENSCAFP00000000212	pdb,4wk6,A,#1	26	231	1.72e-27	32.212

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.097	0.18	0.722	0.004	0.182	0.814

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.114425645592164	0.0276046304541407	0.000445235975066785	0.00756901157613535	0.00712377560106857	0.00801424755120214	0.00890471950133571	0.825912733748887

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.248642177 0.721048909 1.806417929 6.898478776 0.000429914 5.163696984 4.972843546 0.028490569 0.003796680 4.931334768 3.047504149 0.048112093 0.128887994 0.038125619 0.018382730 11.602438765 0.107712733 0.056065097 0.182877734 5.381662012 6.604480294 23.709502216 0.000694677 0.017493327 0.124590361 0.051042281 9.606621581 0.059327000 2.298087723 0.020296969 0.044142810 0.053427957 0.169052893 0.187502966 0.081597008 10.300458458 2.226699763 0.004812313 0.011628498 0.046049947 0.044827994 0.078177045 0.138222129 0.048699708 10.142687334 4.506025266 0.011882060 0.040277287 0.042323207 0.079946065 0.213205191 0.119367345 0.099546065 0.044439618 9.143157095 19.207678689 0.006144827 0.048885486 0.029789200 0.031128087 0.142304046 0.171186156 0.143450957 0.202018659 0.038880169 11.627172789 7.302566805 0.030104062 0.033725193 0.020292878 0.089966816 0.100732974 0.108020853 0.287701593 0.345073571 0.363792707 0.147925734 10.248016637 3.496697313 0.000010020 0.016929669 0.006026886 0.118455315 0.008369245 0.031677040 0.019672096 0.130984013 0.132431430 0.435392437 0.021977631 23.742430433 421.633177559 0.000638601 0.004388601 0.009450838 0.022513856 0.341511540 0.012534704 0.365869280 0.454424230 0.139657163 0.806561934 2.310781973 1.244072208 32.844999066 1119.451416527 0.102732214 0.251782179 0.074374956 0.377286776 0.180288497 0.205020982 1.403964380 0.264023283 0.037836521 0.636277967 0.718206161 0.043328340 0.794725968 317.996591261 1258.654241722 0.078169136 0.299325907 1.604324108 0.409408901 0.030437194 1.078913819 0.841415757 0.105832406 0.538045751 2.018197289 2.820724839 0.061465946 0.006482147 2.029170540 499.799894389 24.144976172 0.219072992 0.324022976 0.000915817 0.032981324 0.001091153 0.106357564 0.001951469 0.009943272 0.005994234 0.043676107 0.003851009 1.486782574 0.008425868 7.892986262 17.598565910 347.376036572 18.622301111 0.213532785 0.293166656 0.000596826 0.009094833 0.022292709 0.611399115 0.004860599 1.846931355 0.878381403 0.501975374 0.010632932 1.029321954 0.541241634 0.348737217 6.389872433 6.998804695 626.074970062 1260.336786248 0.379757508 0.010714357 0.230847305 0.297281348 0.146742572 1.290662089 1.613757006 0.113458787 1.824102268 1.231296006 1.286961230 6.315735319 0.997725100 126.893399442 86.322781468 5.290018850 151.667485117 231.655112477 0.000021634 0.167593000 0.094897900 0.099905000 0.114211000 0.073740700 0.095774100 0.055272200 0.062843700 0.067915600 0.061228900 0.044142200 0.033043500 0.018198600 0.003872400 0.001799050 0.000858358 0.001160730 0.001484310 0.002037150