Protein BNIP3L

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSBTAP00000023684	pdb,2j5d,A,#1	133	177	1.75e-16	100
ENSBTAP00000023684	pdb,2j5d,B,#1	133	177	1.75e-16	100
ENSTGUP00000011996	pdb,2j5d,A,#1	50	94	3.49e-16	97.778
ENSTGUP00000011996	pdb,2j5d,B,#1	50	94	3.49e-16	97.778
ENSMPUP00000002297	pdb,2j5d,B,#1	142	186	3.75e-16	97.778
ENSMPUP00000002297	pdb,2j5d,A,#1	142	186	3.75e-16	97.778
ENSFDAP00000021852	pdb,2j5d,B,#1	122	166	4.07e-16	97.778
ENSFDAP00000021852	pdb,2j5d,A,#1	122	166	4.07e-16	97.778
ENSLOCP00000009130	pdb,2j5d,A,#1	150	194	4.68e-16	93.333
ENSLOCP00000009130	pdb,2j5d,B,#1	150	194	4.68e-16	93.333
ENSXETP00000053966	pdb,2j5d,A,#1	154	198	4.9e-16	97.778

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.029	0.043	0.928	0.032	0.064	0.905

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.180894308943089	0.189024390243902	0.0447154471544715	0.016260162601626	0.016260162601626	0.0142276422764228	0.00813008130081301	0.530487804878049

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.000000043 0.000000043 4.067884635 0.000000043 0.002056825 9.167698520 0.167429584 0.000009334 0.003845818 7.240369522 0.000000043 0.000039924 0.034095174 0.018020305 0.356414464 0.000000043 0.194377358 0.000008578 0.491542415 7.337187830 6.394221925 0.000000043 0.045995297 0.002993924 0.002473981 0.045889380 4.835360776 0.864051540 0.000000043 0.000016769 0.052579119 0.024613176 0.163656428 1.118876171 0.064978475 4.238882940 0.000000043 0.031141320 0.014973217 0.001182831 0.220074687 0.203882893 0.311306479 0.611929587 4.303430053 0.000000043 0.000000043 0.033805422 0.000083928 0.002937749 0.131709202 0.024032936 0.066769586 0.363428272 4.384177015 0.000000043 0.000036823 0.000894764 0.000022500 0.000025901 0.195275651 0.156041529 0.177290559 0.131860106 0.359958976 4.932080584 0.202958787 0.122662941 0.000503167 0.178150983 0.026470021 0.045129947 0.179775566 0.181822782 0.104531510 0.131031538 0.546722895 4.571588703 0.000000043 0.000051847 0.020297635 0.399854460 0.000009931 0.280713442 0.013138939 0.202307107 0.040372001 0.160318167 0.110128043 0.051326171 6.181927600 0.000000043 0.104297831 0.026440684 0.294577648 0.038778956 0.000000001 0.069702178 0.000000124 0.089883620 0.098437007 0.053800026 0.006662348 0.000015283 4.903014225 0.000000043 0.003189424 0.832130360 0.000300195 0.000002128 0.000314146 0.000000130 0.660241285 0.000623372 0.356212062 0.306126819 0.000000001 0.000000002 0.140677034 2.895522971 0.000000043 0.001558546 0.000503124 0.348565926 0.168102222 0.007649821 0.000000045 0.057089072 0.262317908 0.787301145 0.000007488 0.002257671 0.000000002 0.000000003 0.244784935 7.396032389 0.000000043 0.000000003 0.067865218 0.000000002 0.000000002 0.000000002 0.051195653 0.145411137 0.000042890 0.192936831 0.038899795 0.000000001 0.000000002 0.000000003 0.000000010 2.100121457 8.692469707 0.000000043 0.480946676 0.000001506 0.661144797 0.000000002 0.000003264 0.001612780 0.000000006 0.112651413 0.375533218 0.000001337 0.128710406 0.193468926 0.736855261 0.000000010 0.000000020 0.000000012 6.432104897 0.000000043 0.000000003 0.000032980 0.129201421 0.405617004 0.262620490 0.000000001 0.000000001 0.000000002 0.399380929 0.204598173 0.033991021 0.000000081 0.300383610 0.000000010 0.530910931 0.000000012 3.309741309 0.000000041 0.002314800 0.031385600 0.052010000 0.045485800 0.063250800 0.091864500 0.082670300 0.096839900 0.101048000 0.107742000 0.114415000 0.084751500 0.058823400 0.030004400 0.010243400 0.004940000 0.008080960 0.007631110 0.002417160 0.004081300