Protein C12orf65

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSMUSP00000076594	pdb,2rsm,A,#1	21	124	2.66e-74	100
ENSMOCP00000019507	pdb,2rsm,A,#1	24	124	3.51e-70	96.04
ENSRNOP00000071132	pdb,2rsm,A,#1	21	121	2.04e-68	93.069
ENSMAUP00000009016	pdb,2rsm,A,#1	24	123	1.6e-64	92.079
ENSCGRP00000004128	pdb,2rsm,A,#1	24	123	9.79e-63	91.089
ENSPEMP00000004306	pdb,2rsm,A,#1	24	122	1.43e-62	90.099
ENSCATP00000035667	pdb,2rsm,A,#1	24	124	7.31e-61	84.158
ENSTTRP00000015047	pdb,2rsm,A,#1	21	121	3.03e-59	83.168
ENSECAP00000000719	pdb,2rsm,A,#1	21	121	3.59e-59	83.168
ENSJJAP00000023647	pdb,2rsm,A,#1	25	129	5.34e-59	81.905
ENSCLAP00000020911	pdb,2rsm,A,#1	24	124	1.06e-58	83.168

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.032	0.15	0.818	0.024	0.151	0.826

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.509293680297398	0.104089219330855	0.0148698884758364	0.00371747211895911	0.0223048327137546	0.0111524163568773	0.00743494423791822	0.327137546468401

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

1.069788773 0.000000022 5.915070544 0.180048933 0.326934732 6.240795259 0.000000022 0.234373747 1.484439920 6.572526860 0.000000022 0.061271268 0.126343722 0.152123774 1.230570884 0.000000022 0.663388265 0.498049314 2.703883595 5.250284198 5.353770709 0.000000022 0.000000250 0.380099975 1.110121811 0.583807231 5.033566457 0.512745417 0.000000022 0.000640487 0.096057949 0.363501971 0.793570163 0.902262230 0.920859434 5.381569900 0.000000022 0.019918738 0.084336805 0.000122378 0.000943420 0.027814803 0.000761051 0.919006901 7.671331668 0.000000022 0.000000002 0.000000002 0.027460383 0.192552248 0.135143703 0.335217853 0.003387637 0.001922174 5.326513740 0.000000022 0.074086667 0.001824192 0.000002868 0.222690617 0.000784247 0.031880168 0.102269826 0.545383562 0.053482402 3.669510725 0.000000022 0.000000002 0.000000002 0.000023036 0.001435774 0.000057678 0.136633097 0.339464296 0.248014335 0.006176931 0.000451758 4.699405268 0.000000022 0.000000002 0.000000002 0.000000002 0.007672567 0.002259950 0.097891269 0.292474093 0.000323807 0.157560158 0.094602654 0.597612008 3.796660304 0.000000022 0.224874999 0.000000002 0.000000002 0.290530049 0.000036709 0.114256933 0.031163713 1.178885309 0.122446235 0.000005959 0.019684848 4.052793734 4.461432346 0.000000022 0.000000002 0.000000002 0.226256339 0.371380073 0.193136982 0.220289560 0.669847023 0.154341697 0.000000001 0.722006016 0.180448598 0.000649037 0.036378742 17.083353834 0.000000022 0.000000002 0.335173651 0.000000013 0.100758939 0.343675167 0.000167068 0.000003570 0.520093809 0.000000001 0.996906363 0.055367771 0.316636373 0.000000002 0.000000007 1.163145308 0.000000022 0.000000002 0.000000002 0.000000002 0.030657303 0.536415888 0.000038689 0.000251462 0.165844478 0.267739944 0.000000015 0.124453129 0.000000002 0.000000002 0.000000007 0.000000008 0.000000011 0.000000022 0.000000002 0.330068946 0.351330208 0.472248335 0.341757258 0.000027665 0.304155712 0.406351632 0.000000001 0.000000001 0.054829680 1.159246724 0.000000002 1.893345891 0.000000021 0.000000011 1.072809255 0.000000022 0.000000002 0.057091151 0.047458994 0.495572970 0.024851737 0.138784462 1.745463665 0.037743103 0.083270539 0.364291875 0.353192863 0.464046720 0.414996463 1.158392668 0.512720600 1.328150347 0.000000015 1.245204230 0.004491840 0.044879600 0.052853200 0.053303700 0.071165100 0.082016400 0.086317300 0.061806500 0.072104300 0.090719000 0.093223600 0.088275000 0.065856300 0.045378700 0.014227300 0.012126000 0.009185180 0.006726480 0.015565800 0.029778800