Protein CMC2

There are no sufficient 3D structure homologs in Scratch-1D dataset for the Protein family CMC2!

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.089	0.129	0.782	0.221	0.274	0.505

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.217213114754098	0.0983606557377049	0	0	0.0286885245901639	0.00819672131147541	0.00819672131147541	0.639344262295082

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.000021280 0.000021280 2.668268123 0.000021280 0.002560432 6.421620471 0.000021280 0.047944216 0.142016194 10.323438633 0.001155272 0.000000028 0.097749861 0.643112147 0.056761946 0.000331101 0.000000007 0.001559171 1.335006268 7.323656444 10.557299726 0.000235341 0.308306910 0.000264281 0.029598353 0.399791492 6.348428809 0.244967802 0.001654599 0.000000006 0.003780099 0.091255087 0.028519940 0.852757278 0.470867658 5.649913538 0.467568091 0.000000002 0.216417611 0.022491969 0.559675553 0.098993494 0.273924851 0.298637873 8.255131751 0.796990145 0.000000002 0.000000963 0.000013710 0.000023822 0.128203211 0.001937712 0.094160326 0.487306498 4.925123237 0.024855561 0.000000924 0.005638496 0.138371103 0.045400575 0.131938636 0.009946249 0.000349121 0.190053137 0.027574789 4.707027964 28.167167813 0.000000002 0.000000025 0.000000462 0.000000349 0.077891273 0.000010104 0.003401976 0.024999636 0.004357836 0.311970846 5.205111228 9.143157496 0.000000002 0.000000001 0.000000005 0.000000010 0.087179334 0.000023731 0.000000260 0.000002014 0.017126672 0.088787109 0.043651096 5.390273740 44.065942718 0.000000002 0.000000001 0.000000002 0.000000002 0.000340119 0.000000200 0.000004636 0.007131630 1.941639879 1.016306560 0.000001880 0.510105933 38.151419575 944.522826080 0.000000002 0.000000001 0.000000002 0.000000002 0.000000025 0.000000003 0.000000042 0.000000237 0.000057679 0.677205880 0.000004637 1.397772162 5.438483340 38.495243480 1038.187107249 0.000000002 0.000000001 0.000000002 0.000000002 0.000000005 0.000000003 0.000000004 0.000000404 0.000168281 0.000748049 0.000648675 0.035558897 0.000271724 24.814712646 97.005012546 0.017379805 0.000000002 0.000000001 0.004293781 3.209779234 0.000003638 4.965458988 0.000000014 0.000000089 0.000161287 0.027462566 0.000025666 0.000003249 8.052734933 0.000189785 0.000013640 0.000001157 0.134480968 0.000000002 0.000000001 0.000000002 0.000000002 0.000000001 0.000000002 0.000000001 0.000007937 0.002391230 1.983069229 0.000000067 0.000000246 2.776200327 0.000176993 0.000116866 0.000401279 0.000719934 244.578367094 0.000000002 0.000000001 0.000000002 0.000000002 0.000000108 0.000000132 0.000000001 0.000000726 0.522667508 0.000069354 0.000011216 0.262058520 0.563968045 0.000262275 8.512273662 26.803904266 14.211735956 23.233590676 0.000004699 0.047748200 0.072333300 0.049214900 0.043643500 0.086924500 0.055050500 0.089808100 0.082428000 0.090962800 0.092116300 0.123845000 0.082070600 0.038141700 0.008736430 0.008692190 0.002969060 0.001374920 0.003370340 0.020565200