Protein CMPK2

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSACAP00000006924	pdb,3tmk,E,#1	49	227	3.59e-07	25.381
ENSACAP00000006924	pdb,3tmk,G,#1	49	227	3.59e-07	25.381
ENSACAP00000006924	pdb,3tmk,H,#1	49	227	3.66e-07	25.381
ENSACAP00000006924	pdb,3tmk,D,#1	49	227	3.66e-07	25.381
ENSACAP00000006924	pdb,3tmk,A,#1	49	227	3.99e-07	25.381
ENSACAP00000006924	pdb,3tmk,B,#1	49	227	3.99e-07	25.381
ENSACAP00000006924	pdb,3tmk,F,#1	49	227	3.99e-07	25.381
ENSTGUP00000013377	pdb,2w0s,A,#1	30	218	8.47e-07	27.363
ENSTGUP00000013377	pdb,2v54,B,#1	30	218	8.47e-07	27.363
ENSTGUP00000013377	pdb,2w0s,B,#1	30	218	8.47e-07	27.363
ENSTGUP00000013377	pdb,2v54,A,#1	30	218	8.89e-07	27.363

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.005	0.011	0.984	0.017	0.511	0.471

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.403377110694184	0.333958724202627	0.0919324577861163	0.0150093808630394	0.00562851782363977	0.00187617260787992	0.00375234521575985	0.144465290806754

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.003223055 2.367506041 1.738900286 4.622825827 0.000106143 5.172503874 42.918562379 0.028658281 0.045311070 6.697916732 13.935770729 0.011333445 0.059432564 0.001463585 0.189487055 137.013736204 0.116032285 0.170057873 0.329849379 5.816128022 7.218242266 2.896222000 0.009229326 0.044796528 0.002688993 0.160455707 8.702993626 0.204133671 7.496489758 0.026582344 0.015916084 0.030264412 0.377959596 0.810259750 0.019820950 8.894961396 57.138581100 0.000000001 0.012435417 0.057836467 0.192635752 0.249964022 0.106771789 0.012344998 8.827616507 2.957800901 0.000000039 0.000772437 0.000012596 0.000194655 0.216168949 0.025185932 0.016800447 0.108135749 7.233586973 0.177038390 0.032135194 0.009818866 0.079485508 0.000115959 0.088865676 0.049606475 0.055566356 0.000031828 0.000225262 7.541345762 0.280239785 0.013018934 0.032728401 0.052961382 0.000000613 0.040371514 0.103543567 0.409250328 0.000099583 0.001390875 0.002569327 7.872430196 9.080126042 0.029146326 0.000000001 0.000000001 0.070259209 0.000883489 0.065561782 0.083941882 0.012242103 0.000842540 0.050089363 0.000000534 17.355527257 1766.598820123 0.000000001 0.363722833 0.012487770 0.000932821 0.032752561 0.824497723 0.000000005 0.805582307 0.707637225 0.454915260 0.000037763 0.000000010 21.004140735 127.610368548 0.000000016 0.000051929 0.000803248 0.487729042 0.000018837 0.605754459 0.000000001 0.000025108 0.000115266 0.000000001 0.000000002 0.000000003 0.237381325 110.034208245 98.541480724 0.000006208 0.000001524 0.000013915 0.010880524 0.000080566 1.036354689 0.000000001 0.000000196 1.225677891 0.000000001 0.651030142 0.000000003 0.107627907 20.725778627 589.146110780 51.505322507 0.000000001 3.215536066 0.000000336 0.000014014 0.051758905 0.245109719 8.356612821 0.008529487 0.063342722 5.301503948 0.000000002 0.000000083 0.000000048 0.004891632 2.494629867 139.831597654 19.008887172 0.856223306 0.000000407 0.000000002 0.000000050 0.192062365 0.816171917 0.000090374 0.883154443 1.216471182 2.517380721 0.000000206 0.012239075 0.000086578 8.270800549 0.162249108 0.004302363 33.539557248 112.055641422 0.000000001 0.000415437 1.313474877 0.000178392 0.000214514 0.090210185 0.088963242 0.054662882 0.001273742 0.245730637 0.000000070 1.248777111 5.740929879 79.498615681 96.285340680 0.035996372 199.911383888 344.031220889 0.000003675 0.148675000 0.089574800 0.080234500 0.083685400 0.081994200 0.095101900 0.071908800 0.068738600 0.071361000 0.074191400 0.063044700 0.039578400 0.019875700 0.004753240 0.001575380 0.001890710 0.000731244 0.001105670 0.001975050