Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein IDStructureStartEndE valueBit score
ENSBTAP00000018778pdb,1ocr,I,#12742.76e-48100
ENSBTAP00000018778pdb,1occ,I,#12742.76e-48100
ENSBTAP00000018778pdb,1ocz,I,#12742.76e-48100
ENSBTAP00000018778pdb,2occ,I,#12742.76e-48100
ENSBTAP00000018778pdb,3wg7,V,#13741.37e-47100
ENSBTAP00000018778pdb,3ag4,I,#13741.37e-47100
ENSBTAP00000018778pdb,3ag3,I,#13741.37e-47100
ENSBTAP00000018778pdb,2eil,I,#13741.37e-47100
ENSBTAP00000018778pdb,3wg7,I,#13741.37e-47100
ENSBTAP00000018778pdb,1v54,I,#13741.37e-47100
ENSBTAP00000018778pdb,2eim,I,#13741.37e-47100

Alignment variation features

Conservative sites proportionIntermediate sites proportionVariable sites proportion Conservative sites heterotachy weightIntermediate sites heterotachy weightVariable sites heterotachy weight
0.0470.3080.6450.1250.5050.37

Site diversity ≤ 0.1250.125 < Site diversity ≤ 0.250.25 < Site diversity ≤ 0.375 0.375 < Site diversity ≤ 0.50.5 < Site diversity ≤ 0.6250.625 < Site diversity ≤ 0.75 0.75 < Site diversity ≤ 0.875Site diversity > 0.875
0.6153846153846150.0256410256410256000000.358974358974359

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V



Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)