Protein COX7A2L

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSBTAP00000019808	pdb,3wg7,W,#1	22	79	3.23e-40	100
ENSBTAP00000019808	pdb,2eij,W,#1	22	79	3.23e-40	100
ENSBTAP00000019808	pdb,1v54,J,#1	22	79	3.23e-40	100
ENSBTAP00000019808	pdb,3wg7,J,#1	22	79	3.23e-40	100
ENSBTAP00000019808	pdb,3ag2,J,#1	22	79	3.23e-40	100
ENSBTAP00000019808	pdb,2y69,J,#1	22	78	1.95e-39	100
ENSBTAP00000019808	pdb,2zxw,J,#1	22	78	1.95e-39	100
ENSBTAP00000019808	pdb,3abl,J,#1	22	78	1.95e-39	100
ENSBTAP00000019808	pdb,1ocz,J,#1	22	77	2.49e-38	100
ENSBTAP00000019808	pdb,1occ,J,#1	22	77	2.49e-38	100
ENSBTAP00000019808	pdb,1ocz,W,#1	22	77	2.49e-38	100

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.641	0.078	0.281	0.921	0.015	0.064

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.12	0.189090909090909	0.0872727272727273	0.0145454545454545	0.0109090909090909	0	0	0.578181818181818

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.000000032 0.000000032 2.709018445 0.000000032 0.000541395 3.621796856 0.000000032 0.100360070 0.020528035 5.119058107 0.000000130 0.049247678 0.019729066 0.013765231 0.817459717 0.075489219 0.025743099 0.187076076 0.495495475 4.324835617 5.928520238 0.297295229 0.201808525 0.044965068 0.055389550 0.207630442 4.957792693 0.866920130 0.000000032 0.003565173 0.107998820 0.041295926 0.096676253 0.654392142 0.085389937 6.135253695 0.000000032 0.008780347 0.138908100 0.000026675 0.141380234 0.083613423 0.179349750 0.056034136 6.650171163 0.000000032 0.072882231 0.000038316 0.000004048 0.275735699 0.306995495 0.010831040 0.219398289 0.113422830 9.325807051 0.000000032 0.000000038 0.028634217 0.000175857 0.033741689 0.111099868 0.000739737 0.151970778 0.648173878 0.027842585 8.888259032 0.000000032 0.000000001 0.045915897 0.000769727 0.001645862 0.023390756 0.336475933 0.134297138 0.103318144 0.598163337 0.478345341 10.861652739 0.000000032 0.000000001 0.034186910 0.000000001 0.040677001 0.214681266 0.006299917 0.604894358 0.000137825 0.025551020 0.474606007 0.008567000 6.974733953 0.000000032 0.440158740 0.334759926 0.000000001 0.000000001 0.020356994 0.000000451 0.213996787 0.294262490 0.000630376 0.167406235 0.018627163 0.878938337 8.051231673 0.000000032 0.310367687 0.066282207 0.000000001 0.000000001 0.113292610 0.210999975 0.000000118 0.248272371 0.132337252 0.000053183 0.060819617 0.000000158 7.694106915 11.510872945 0.000000032 0.000000002 0.000007896 0.000043303 0.000003138 0.055003688 0.000203064 0.228224753 0.000021378 0.298086612 1.951770506 1.459970879 0.326398977 0.000010870 4.067688425 7.524392030 0.000000032 0.000000001 0.687925630 0.064782749 0.152953493 0.000003635 0.002517320 0.476898324 0.000000004 0.000246931 1.993890572 0.078596902 0.000000003 0.000000004 0.000000009 0.000000007 14.631851186 0.000000032 1.111190446 1.358310254 0.047228314 0.000013948 0.000151946 0.000002283 0.000004130 0.000087425 0.117894393 1.146887001 0.894861568 0.007891390 2.521177603 0.000000009 0.000008421 5.070262603 12.788370664 0.000000032 0.000000001 0.000005831 0.000000001 0.000000001 0.000004795 0.000044615 0.000000004 0.262049982 0.000919761 0.110316052 0.001813444 0.630794555 0.723048016 0.628071218 15.855691241 2.225603313 6.512420061 2.922934529 0.003110060 0.088093900 0.095285300 0.086268800 0.092558200 0.086371300 0.087560200 0.077256300 0.087518800 0.071553700 0.059449100 0.047388000 0.037239700 0.025652100 0.010935400 0.014338700 0.005583340 0.002539440 0.005045580 0.016252400