Protein CPT1A

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSECAP00000008526	pdb,1t7q,B,#1	21	616	0	90.604
ENSHGLP00100013476	pdb,1ndi,A,#1	30	625	0	90.101
ENSETEP00000004673	pdb,1nm8,A,#1	22	546	0	69.524
ENSPSIP00000004083	pdb,1t1u,A,#1	19	617	0	79.466
ENSECAP00000008526	pdb,1t7q,A,#1	21	616	0	90.604
ENSONIP00000000613	pdb,1t7q,A,#1	29	623	0	46.644
ENSPMAP00000002005	pdb,1t7q,B,#1	32	634	0	55.372
ENSPMAP00000002005	pdb,2h3p,B,#1	32	634	0	55.372
ENSBTAP00000028699	pdb,1xmc,B,#1	11	608	0	79.766
ENSTNIP00000016404	pdb,1nm8,A,#1	18	592	0	70.66
ENSONIP00000014583	pdb,1t7o,A,#1	41	631	0	49.915

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.061	0.175	0.763	0.005	0.109	0.886

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.0927914110429448	0.163726993865031	0.0460122699386503	0.0168711656441718	0.00690184049079755	0.00115030674846626	0.00191717791411043	0.670628834355828

Loading ...

Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.367080872 0.055599249 1.888913332 0.005570972 0.003296449 4.973378061 0.719391767 0.148044266 0.262191971 6.281981072 0.000000608 0.005533612 0.068888510 0.059191243 0.227920566 0.286462855 0.116150617 0.193803817 0.510448857 6.904707043 7.424523045 0.014400840 0.001031635 0.010578466 0.039909064 0.312355848 8.116958450 0.478909447 0.000170697 0.013225357 0.005325168 0.001782001 0.189025550 1.125208389 0.400694330 7.384014776 0.001179730 0.009396689 0.011419837 0.007147204 0.083663825 0.531911565 0.388179959 0.337909971 7.762629891 0.030370739 0.019575061 0.009331351 0.020448212 0.126715003 0.557582865 0.087460160 0.162980137 0.170921400 8.096678833 0.009357255 0.002500620 0.000021548 0.013738256 0.109506254 0.121722290 0.113714870 0.361928975 0.199452522 0.177679683 8.027952960 0.000000009 0.010823724 0.031004710 0.003725693 0.142827581 0.034081670 0.242762135 0.207062728 0.198769488 0.378472522 0.502573133 9.183109082 0.029908205 0.003444194 0.028100578 0.015006799 0.214212849 0.120661502 0.154539093 0.156834220 0.171029109 0.193662840 0.602746154 0.865826868 11.813038101 0.000000009 0.000497026 0.013927955 0.008265112 0.325412574 0.007278468 0.358366836 0.030005118 0.269485846 0.355350119 0.371498628 0.718415086 2.319717570 11.638105929 0.000000009 0.012462740 0.026120218 0.000044515 0.323051334 0.132045848 0.249117508 0.169461234 0.071738808 0.068319133 0.055945848 0.322241990 1.236458321 1.503029647 5.214278456 0.000000009 0.000000001 0.000027338 0.000002126 0.388935619 0.018437273 0.256511876 0.000000023 0.181214198 0.284469365 0.167613334 0.000000025 0.393820751 0.838055886 0.512274782 1.432790089 0.000000009 0.045702763 0.000000080 0.000000001 0.505693372 0.001052969 0.327883661 0.000249966 0.197206391 0.110420494 0.244916868 0.378764812 1.036390361 0.772817031 0.056405773 1.454391546 20.753918159 0.000000009 0.000000001 0.005002360 0.000007804 0.201802640 0.043624081 0.814017286 0.195321649 0.064331960 0.120181780 0.214810530 0.996089553 1.848235206 0.929966457 1.656196422 2.760708987 3.405843961 5.996494752 0.158590692 0.015309660 0.008914078 0.007190394 0.094674180 0.046625232 0.324166839 0.000740557 0.000069699 0.169734344 0.014894908 0.544435413 0.367043609 2.851912465 2.247847216 1.933322527 2.385984800 0.987367148 14.401715456 0.011242400 0.163647000 0.102547000 0.086918600 0.089402200 0.087576400 0.084023400 0.071901400 0.076130900 0.064880800 0.058605600 0.039739700 0.025308900 0.014787200 0.006200110 0.004441830 0.002328900 0.002578990 0.002329410 0.005409460