Protein CPT2

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSDARP00000122226	pdb,4ep9,A,#1	45	668	0	69.872
ENSFDAP00000004871	pdb,2h4t,B,#1	6	628	0	85.233
ENSSHAP00000008301	pdb,4eyw,B,#1	1	608	0	79.112
ENSHGLP00000004184	pdb,4eph,A,#1	34	656	0	85.554
ENSMLUP00000002210	pdb,2fw3,A,#1	34	654	0	85.024
ENSTRUP00000042621	pdb,2h4t,A,#1	44	664	0	57.717
ENSMPUP00000006583	pdb,4eyw,B,#1	30	614	0	83.761
ENSAMEP00000010045	pdb,4ep9,A,#1	34	657	0	84.135
ENSCGRP00000015319	pdb,4eyw,A,#1	33	659	0	89.314
ENSMODP00000025105	pdb,2rcu,A,#1	61	683	0	55.449
R07H5.2a	pdb,2h4t,A,#1	27	636	0	44.878

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.055	0.456	0.489	0.048	0.24	0.713

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.690344062153163	0.0277469478357381	0.0110987791342952	0.00110987791342952	0.00221975582685905	0.00221975582685905	0.00221975582685905	0.263041065482797

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.556993642 0.207874360 1.486382694 0.005007225 0.210104640 3.897542537 0.170096152 0.198288295 0.794510023 5.237366610 0.032237641 0.009981386 0.108936489 0.149407589 1.327236473 0.074692232 0.201263080 0.104981242 0.855398954 5.542713786 6.427318904 0.000000006 0.012165616 0.076389973 0.191281685 0.489694972 6.013587212 1.422084387 0.000000006 0.028172380 0.041637046 0.040473208 0.116477677 1.236093015 0.857544309 5.708619866 0.000000006 0.096861384 0.021842624 0.038945731 0.349811573 0.960828584 0.231025072 1.561518423 6.136108215 0.000000006 0.028396047 0.015419967 0.075623187 0.116594253 0.447286074 0.273061897 0.363241671 0.918126000 5.703438111 0.000000006 0.048746080 0.041238016 0.121878659 0.156151070 0.313221128 0.296877846 0.438665851 0.327728883 1.180250799 6.526702176 0.000000006 0.000000001 0.005121822 0.000004984 0.405500676 0.366541221 0.050253433 0.253982148 0.548552790 0.359545656 1.098327542 6.401588022 0.000000006 0.000349097 0.123910531 0.000000019 0.000015652 0.149125557 0.528901231 0.086272654 0.008923257 0.807386154 0.213949575 1.675800436 8.185266096 0.000000006 0.088580606 0.000000001 0.000000001 0.181747274 0.069436997 0.771105815 0.000000001 0.145012710 0.432264342 0.330507403 0.301786645 3.108615511 8.585027623 0.000000006 0.000000001 0.095142863 0.000000004 0.104849801 0.260534023 0.000000001 0.194553567 0.258851836 0.401829702 0.248235058 1.096434155 1.356882244 3.822136227 9.118107726 0.000000006 0.000000001 0.000000001 0.000000001 0.672481429 0.005946927 1.025330035 0.001219685 0.000000001 0.000109600 0.336029433 0.336947933 1.135922993 1.551768123 0.122671552 4.185273630 0.000000006 0.000000023 0.000000001 0.000000024 0.155569995 0.000000019 0.103020994 0.000000001 0.402764240 0.000000001 0.001263385 1.095471063 0.000078718 0.972471925 2.103523319 6.702453164 33.960479239 0.000000006 0.000000001 0.002682169 0.000000068 0.486263981 0.000002329 0.358979301 0.234758949 0.001785818 0.204583102 0.323800033 0.266656579 1.257168214 0.000000009 0.883537250 0.000000017 4.477275305 13.091864115 0.000000006 0.169806457 0.182599757 0.000136681 0.000009319 0.000765167 0.364280596 0.000013996 0.648804906 0.000022679 1.061465673 0.557724315 1.288124279 4.658915597 28.826045721 16.718944172 0.000000288 0.001448215 21.722115731 0.016026700 0.170298000 0.105556000 0.083261500 0.082949800 0.083887700 0.075226900 0.071632200 0.076433300 0.070087900 0.059307900 0.041636700 0.026366400 0.011602700 0.005082140 0.005954760 0.003879480 0.004479660 0.003777040 0.002552830