Protein DHX30

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSPSIP00000014215	pdb,3kx2,B,#1	91	811	1.43e-104	32.558
ENSGALP00000052194	pdb,3kx2,B,#1	174	890	2.16e-102	31.962
ENSLOCP00000002501	pdb,3kx2,B,#1	205	918	2.44e-101	32.832
ENSEEUP00000009567	pdb,3kx2,B,#1	195	910	2.84e-101	31.793
ENSLAFP00000012853	pdb,3kx2,B,#1	188	904	2.84e-101	32.206
ENSFALP00000005243	pdb,3kx2,B,#1	116	832	4.62e-100	31.471
ENSMUSP00000029336	pdb,3kx2,B,#1	188	904	5.21e-100	31.664
ENSBTAP00000008082	pdb,3kx2,B,#1	198	913	5.64e-100	32.418
FBpp0307146	pdb,3kx2,B,#1	147	895	7.2e-100	31.184
ENSNGAP00000013879	pdb,3kx2,B,#1	190	906	1.67e-99	31.75
ENSGACP00000013600	pdb,3kx2,B,#1	187	898	3.29e-99	32.289

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.024	0.05	0.926	0.017	0.338	0.645

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.128152866242038	0.125605095541401	0.0690445859872612	0.0578343949044586	0.0481528662420382	0.0300636942675159	0.018343949044586	0.522802547770701

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.212954399 0.035424777 2.431937148 0.005051577 0.000032672 6.317689117 0.263413651 0.142160064 0.051393804 6.869832796 0.009312621 0.010053481 0.075371163 0.034944821 0.050754397 0.004637842 0.194604572 0.073394302 0.343172096 5.979759811 7.441096573 0.037698628 0.000299055 0.028773420 0.046361529 0.036787220 7.720844068 0.151135918 0.000000049 0.001128657 0.019369539 0.019735609 0.142816799 0.907034941 0.187550541 6.549922170 0.000001663 0.001220455 0.005534818 0.004018145 0.055370407 0.154173769 0.246106834 0.045035892 5.755292069 0.003424512 0.005916825 0.000014261 0.000388327 0.104851157 0.252103555 0.051141446 0.012812787 0.046412108 5.216699590 0.008480708 0.006340859 0.005338065 0.000049908 0.026718823 0.143939453 0.173017428 0.085142779 0.048274383 0.023382221 5.338485495 0.000109199 0.011117800 0.010316786 0.000389391 0.187653531 0.091228507 0.092015189 0.062961700 0.180645555 0.070469188 0.050133322 7.616983884 0.000000049 0.000005214 0.027249320 0.000018219 0.013008733 0.102267273 0.117344561 0.017441215 0.122733666 0.151375572 0.055101409 0.000763995 14.278768316 0.000000049 0.000000001 0.000000002 0.136834542 0.011725282 0.365378977 0.262283282 0.008556678 0.070374234 0.000048212 0.378147529 0.150570534 0.186653955 22.293749804 0.000000049 0.000000001 0.000201682 0.000075246 0.261315962 0.064851370 0.104712991 0.008397808 0.321200027 0.000062601 0.392421708 0.030773339 0.005727978 4.115631759 20.037534179 0.000000049 0.002640892 0.198648591 0.039614394 0.135175380 0.277625130 0.033193101 0.197212624 0.000609812 0.222589256 0.006947613 0.142723073 0.000000337 0.000000008 4.247405639 25.636106696 1.571777495 0.025533153 0.092194697 0.000370107 0.000000027 0.000872247 0.413056062 0.074242879 0.147050833 0.000001643 0.005681844 0.053803367 0.576145285 0.000000009 4.948438643 17.347171965 34.376670423 0.000000086 0.000000001 0.116507289 0.000077566 0.096370210 0.376287884 0.005342315 0.000132736 0.000309717 0.043541026 0.334229194 0.808522462 0.792356960 0.775302479 1.585118453 2.974557782 11.766946351 112.551350167 0.000000085 0.029971698 0.027373068 0.000243688 0.000363641 0.339770484 0.282582161 0.153421882 0.445749269 0.162054445 0.445665840 0.148006852 1.211380044 1.454134407 7.553938719 17.319810334 3.541147109 2.370478903 13.278521319 0.002034830 0.105645000 0.061091800 0.056643300 0.085690900 0.077083800 0.092251400 0.080046600 0.091651300 0.103775000 0.104034000 0.078636900 0.039282800 0.012761200 0.003375590 0.000975819 0.001073830 0.001095420 0.001205940 0.001643800