Protein DLAT

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSCAPP00000003132	pdb,1fyc,A,#1	123	224	7.14e-66	99.02
ENSPTRP00000007349	pdb,1fyc,A,#1	214	315	6.14e-65	100
ENSMMUP00000013687	pdb,1fyc,A,#1	185	286	6.96e-65	100
ENSCPOP00000032206	pdb,1fyc,A,#1	215	316	9.07e-65	99.02
ENSTTRP00000009973	pdb,1fyc,A,#1	214	315	1.93e-64	98.039
ENSTBEP00000009914	pdb,1fyc,A,#1	121	222	4.94e-64	96.078
ENSSHAP00000015038	pdb,1fyc,A,#1	120	221	7.15e-64	96.078
ENSOCUP00000013395	pdb,1fyc,A,#1	213	314	7.91e-64	97.059
ENSFDAP00000018110	pdb,1fyc,A,#1	218	319	2.66e-63	98.039
ENSOGAP00000007668	pdb,1fyc,A,#1	212	313	3.21e-63	98.039
ENSHGLP00000008501	pdb,1fyc,A,#1	220	321	3.62e-63	98.039

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.094	0.177	0.73	0.439	0.132	0.429

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.357777777777778	0.100740740740741	0.0155555555555556	0.00148148148148148	0.0037037037037037	0.00148148148148148	0.00518518518518519	0.514074074074074

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

2.378282610 0.000136663 1.838363281 0.000000133 0.021565130 4.944887915 0.290296345 0.406434941 0.758104084 4.958363572 0.000000178 0.043667265 0.221413048 0.691213177 1.199147867 0.900575603 0.493467763 0.663693215 1.608496408 4.267094288 8.015213137 0.000002780 0.000489332 0.092375880 0.292670484 0.477275704 7.441651359 1.513511882 0.000000055 0.010812736 0.015123307 0.167877263 0.234245636 1.586074366 0.344704972 6.555724347 0.000000055 0.017165912 0.011046307 0.000905034 0.224105737 0.126221069 0.593493473 0.182550112 7.222742350 0.000000055 0.000146308 0.002413733 0.000723932 0.266523682 0.268339742 0.182262744 0.112964263 0.440128873 6.816260144 0.000000055 0.000017894 0.021383652 0.020175907 0.003509555 0.189689183 0.185636404 0.127970164 0.117415799 0.233739926 6.864770061 0.000000055 0.015640682 0.000000542 0.022365822 0.227761385 0.037044080 0.383745646 0.021545836 0.024428603 0.351571945 0.110413345 6.020313979 0.000000055 0.056839122 0.000000001 0.000000026 0.240688811 0.034859274 0.280899700 0.133972496 0.344111860 0.146645714 0.383061375 0.000116060 6.189254443 0.000000111 0.011493274 0.000000023 0.019052381 0.440574912 0.000005416 0.383167920 0.272802213 0.000004155 0.379467315 0.024888078 0.387700438 0.586151345 3.852932181 0.000000055 0.000010117 0.000000871 0.000166481 0.604737133 0.000000056 0.000000726 0.000000033 0.044500470 0.218263815 0.416946186 0.523676372 0.000000015 1.679061203 3.987909402 0.000000055 0.000000017 0.113204620 0.539966252 0.000078691 0.013566651 0.006352794 0.089761054 0.374494733 0.000036767 2.060731240 0.000024708 0.026922282 4.542267719 3.880687040 3.513169513 0.000000055 0.000025402 0.000004738 0.000000088 0.407702948 0.000000535 1.353451695 0.000000632 0.101493360 0.000000003 0.097297715 0.695808707 0.354158454 0.191724977 1.346277172 0.000000015 10.796637826 0.000000055 0.000000001 0.000000001 0.108599080 0.106801858 0.191353312 0.550465845 0.509132560 0.814225337 0.327768836 1.005195159 0.008889996 0.697325437 1.080396991 1.566876119 1.617791024 23.410481568 0.000000021 0.000000055 0.003038570 0.000000042 0.000101983 0.232358420 0.239924613 0.538617080 0.000000952 0.380461338 0.400916068 0.667045850 0.290291847 0.222974686 0.365997316 0.000000014 1.000830544 11.453346072 0.000000021 3.447896610 0.001825910 0.112029000 0.085725300 0.078404900 0.090079800 0.064838700 0.092777600 0.070237700 0.067291200 0.070889900 0.087292800 0.077355600 0.046927300 0.016020500 0.007344550 0.006670330 0.001863080 0.004659320 0.006746490 0.011019900