Protein EARS2

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
FBpp0075169	pdb,1n78,A,#1	21	500	2.12e-91	36.585
FBpp0075169	pdb,2cv0,A,#1	21	500	2.12e-91	36.585
FBpp0075169	pdb,1n77,A,#1	21	500	2.12e-91	36.585
FBpp0075169	pdb,2dxi,B,#1	21	500	2.12e-91	36.585
FBpp0075169	pdb,2cv2,A,#1	21	500	2.12e-91	36.585
FBpp0075169	pdb,2cv2,B,#1	21	500	2.12e-91	36.585
FBpp0075169	pdb,2cv1,A,#1	21	500	2.12e-91	36.585
FBpp0075169	pdb,2cv0,B,#1	21	500	2.12e-91	36.585
FBpp0075169	pdb,1n78,B,#1	21	500	2.12e-91	36.585
FBpp0075169	pdb,2cuz,A,#1	21	500	2.12e-91	36.585
FBpp0075169	pdb,1n75,A,#1	21	500	2.12e-91	36.585

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.039	0.108	0.853	0.117	0.623	0.259

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.63582966226138	0.117474302496329	0.013215859030837	0.00293685756240822	0	0	0	0.230543318649046

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

8.552332895 0.000034018 2.532523520 0.055820482 0.003685231 5.315221569 9.137137988 0.128463041 0.039303415 6.768693617 0.000860819 0.031553378 0.033791416 0.250820181 0.175046770 0.019628661 0.038639296 0.277044255 0.125925633 6.118900253 7.564739993 0.050956813 0.019858685 0.000007677 0.078635490 0.012207448 8.371275177 0.001021152 8.085634561 0.023572335 0.000407175 0.034254599 0.103438511 0.181186542 0.527435436 7.939033122 0.010712149 0.000004026 0.026617333 0.000037956 0.156101125 0.041479759 0.194706647 0.000079051 6.564642691 0.001159833 0.031895694 0.034799242 0.000000001 0.018062526 0.581204732 0.069673989 0.000027512 0.000225177 5.343831833 0.000038683 0.000000001 0.002149131 0.043425793 0.102104659 0.019398158 0.191829578 0.208267810 0.238952404 0.001162351 5.605312381 3.940058671 0.000002526 0.000001269 0.000000063 0.007745188 0.099850208 0.173915708 0.272525559 0.130086820 0.627726667 0.030790586 10.600541384 21.849559487 0.000000001 0.000036313 0.000008651 0.333175665 0.000476553 0.000860925 0.060806270 0.272805359 0.916490489 0.189811505 0.001899713 20.471088285 0.000019529 0.122735726 0.000000001 0.016108000 0.086383613 0.000000001 0.000000001 0.000000001 0.192981601 0.000000001 0.000000085 0.499272478 0.906922873 42.604781240 0.000121340 0.000000001 0.000000002 0.001995973 4.424408320 0.000000104 0.000668255 0.000000003 0.000023925 0.000000723 0.000025719 0.174180903 9.877658727 0.000599072 189.857101369 90.718546437 1.519800478 2.139339807 0.000004108 0.737768690 0.000000165 3.242530686 0.000000008 2.887891154 0.000000001 0.000000001 0.000000001 0.000000004 0.039028348 0.000000037 0.000108719 0.000000239 0.000000001 0.000000001 0.000000001 0.000531175 0.000000054 6.600121438 0.000004873 0.029784249 7.783650379 8.413510341 0.024199726 0.000000354 0.000000007 0.000000037 0.000000394 0.000000400 0.000049108 0.000000001 2.428939246 1.231291130 0.000002841 0.000005385 0.000004732 3.668100751 0.007202017 0.000436477 0.001299465 0.000010114 2.740455149 36.968242218 0.000000116 0.000016905 0.000024279 0.000000530 0.000000239 0.085136218 0.000000001 0.000000001 0.000000001 0.000000574 0.482116206 0.363845583 0.000012341 0.000000001 0.000000001 0.796068396 0.463696095 2.017348259 6.778004483 0.000000394 80.858418148 0.000000530 30.798706951 0.000418943 0.128507000 0.087931800 0.072118200 0.094290800 0.072567200 0.088110500 0.077517500 0.079981200 0.089587400 0.093291500 0.066939600 0.028232500 0.013373100 0.002685820 0.000253529 0.000250251 0.000188509 0.000859364 0.002894720