Protein ETFB

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSMFAP00000009104	pdb,1efv,B,#1	4	255	2.77e-179	98.81
ENSMFAP00000009104	pdb,2a1u,B,#1	4	255	1.55e-178	98.413
ENSHGLP00100006202	pdb,1efv,B,#1	4	255	5.96e-171	93.254
MGP_SPRETEiJ_P0082494	pdb,1efv,B,#1	4	255	6.79e-171	92.063
ENSJJAP00000005143	pdb,1efv,B,#1	4	255	2.56e-170	91.667
MGP_SPRETEiJ_P0082494	pdb,2a1u,B,#1	4	255	3.64e-170	91.667
ENSHGLP00100006202	pdb,2a1u,B,#1	4	255	4.68e-170	92.857
ENSJJAP00000005143	pdb,2a1u,B,#1	4	255	2.27e-169	91.27
ENSPANP00000040864	pdb,1efv,B,#1	90	328	3.87e-169	99.163
ENSPANP00000040864	pdb,2a1u,B,#1	90	328	5.09e-168	98.745
ENSSTOP00000005574	pdb,1efv,B,#1	14	249	7.69e-165	95.763

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.317	0.411	0.272	0.538	0.173	0.289

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.555555555555556	0.0115740740740741	0.00462962962962963	0.00231481481481481	0.00462962962962963	0.00694444444444444	0.0115740740740741	0.402777777777778

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

1.200077285 0.254296197 0.867814039 0.000112228 0.735367312 2.491365217 0.010513387 0.915970817 1.841576380 2.297438986 0.004572515 0.128484776 0.079028927 0.428409324 0.493579900 0.440295842 0.292097073 1.533345178 1.653065415 2.020235022 2.480586239 0.000015325 0.084128388 0.099751918 0.731545232 1.016786737 2.780372761 1.270424505 0.000000716 0.256012086 0.532746978 0.473367371 0.341346206 0.676676681 0.657453428 7.190473063 0.000000242 0.035846726 0.819718438 0.378832966 0.138215931 1.291245995 0.656695177 2.229634981 3.605405062 0.000000257 0.094249531 0.038189295 0.437630891 0.668933305 0.230156713 1.137674331 1.128446167 3.715911684 4.383433059 0.000000182 0.077829742 0.001943059 0.055981083 0.355118927 0.181276121 0.698583106 0.075025533 0.921284835 1.481247472 5.252810699 0.000000067 0.000009001 0.465826796 1.025429459 0.138403797 0.485468326 0.084851348 0.037966207 0.018931958 1.063939914 2.820919481 6.088464803 0.000000059 0.000005849 0.000015538 0.072716783 0.415776347 2.010447527 0.000235753 0.828492143 0.229152405 1.815292132 2.199954503 1.244382743 11.118941105 0.000000096 0.000001279 0.623233313 0.167252967 0.808133488 0.596056274 0.294198805 0.208975222 0.000719214 0.328997029 1.130975839 1.888599025 1.752424101 13.101564140 0.000012093 0.000256709 0.002537233 0.002333780 2.405168752 0.824233762 0.003578663 0.403469565 0.010215832 2.955367728 9.078308679 4.202234402 0.015201800 0.017465763 16.888174062 0.000000104 0.000001475 0.000012861 0.681269420 0.000009347 0.670644560 0.008587173 2.656820085 0.000271821 0.000955252 1.419863446 0.005075253 7.550762248 0.091235982 6.061070575 10.820870206 0.000000011 0.237878608 0.000000782 0.000036450 0.000018072 0.000245882 0.000017982 0.506891512 0.000012593 0.000184970 2.710942581 0.000839121 0.004383361 8.700917875 0.000003060 11.371786715 45.969957879 0.000000102 0.000049863 0.000347789 3.913355325 3.879463848 0.000356930 0.000113164 0.000166917 0.004196661 0.000323357 0.001076247 8.345121622 0.027919236 0.149160046 0.000038783 0.001022191 0.000055497 47.871454069 0.000004215 0.244564435 0.051962243 0.000628251 0.000675374 0.699621795 0.986328467 0.005048505 0.002359122 0.020466128 1.948153061 0.020380526 2.693116422 6.839724956 0.000219068 0.001297795 0.003664538 8.461068834 66.348863371 0.044510300 0.176403000 0.061350700 0.073057000 0.073456800 0.071997900 0.078206300 0.060901000 0.058286100 0.071697000 0.062422200 0.060794800 0.036838400 0.015721100 0.021201700 0.007811710 0.008126590 0.005569060 0.001795660 0.009852840