Protein FDXR

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSTGUP00000009115	pdb,1e1l,A,#1	1	454	0	72.088
ENSCGRP00001000859	pdb,1e1n,A,#1	39	492	0	88.326
ENSOGAP00000015105	pdb,1e6e,A,#1	38	494	0	87.09
ENSSHAP00000022233	pdb,1e1n,A,#1	73	522	0	73.451
ENSPEMP00000005048	pdb,1e1k,A,#1	40	494	0	89.451
ENSOPRP00000001405	pdb,1e6e,A,#1	36	495	0	74.242
ENSCAFP00000006917	pdb,1e6e,C,#1	37	492	0	90.789
ENSPSIP00000008383	pdb,1cjc,A,#1	43	500	0	72.052
ENSECAP00000007578	pdb,1e6e,C,#1	37	491	0	91.868
ENSMGAP00000009478	pdb,1e6e,A,#1	1	434	0	70.507
ENSPCOP00000021340	pdb,1cjc,A,#1	38	527	0	84.082

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.112	0.39	0.498	0.067	0.521	0.411

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.66374269005848	0.0453216374269006	0.0116959064327485	0.00146198830409357	0	0.00292397660818713	0.010233918128655	0.264619883040936

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.476677533 0.272916083 1.732819910 0.007928016 0.246493136 3.357432750 0.152395970 0.224849349 0.806309973 3.061425760 0.000210814 0.081887330 0.371538936 0.622463924 1.117068346 0.333167141 0.409059919 0.301997989 1.705587984 4.356637958 4.306573332 0.000000003 0.005594954 0.000041088 0.139227454 0.277726713 5.492239552 1.642182102 0.039813845 0.041828820 0.105693734 0.042687534 0.272245543 1.401989298 0.905112887 6.378065847 0.000000003 0.000048574 0.038458473 0.056924449 0.199878169 0.397362968 0.417665938 0.713748251 6.864224024 0.000000003 0.000949650 0.000083809 0.104417742 0.178082555 0.497350613 0.086191283 0.490413199 1.304467180 4.302480172 0.028431844 0.000000001 0.062990027 0.000006691 0.102119129 0.145355137 0.196937946 0.434484790 0.373408349 1.077683265 6.142046640 0.000000003 0.017900799 0.006030891 0.000463729 0.236502135 0.038510450 0.236727569 0.217648965 0.333103692 0.493881871 0.875690188 5.741125530 0.000000003 0.033680311 0.000000001 0.000000001 0.181077658 0.393302158 0.104734431 0.000001344 0.000054084 0.068916185 0.869382844 0.500265989 6.287461192 0.000000003 0.034986039 0.000000001 0.000000001 0.000039713 0.076659728 0.429001578 0.272284010 0.431595979 0.060068449 0.017191763 0.347696095 0.756405626 2.858524465 0.000000003 0.000000001 0.000000001 0.000000001 0.294177463 0.301560881 0.356187866 0.004526213 0.327989558 0.071925109 0.364286469 0.000000005 0.358353925 0.000000004 0.000000006 0.000000003 0.000000001 0.000000001 0.000000001 0.654432945 0.000000008 0.000000001 0.000000001 1.452136982 0.003386407 0.000000001 0.000000066 0.535807514 0.000000004 0.000000006 0.000000015 0.000000003 0.000000001 0.000000001 0.191242739 0.000000002 0.000094041 0.742015850 0.000000004 0.000000003 0.808393181 0.423076428 0.000086921 0.000000012 0.000000004 0.000000006 0.000000015 0.000000024 0.000000003 0.034853683 0.300708055 0.076098949 0.418084003 0.436535884 0.181058667 0.000010998 0.026317005 1.131204228 0.119373053 0.613128525 0.000000061 0.372198697 0.000000006 0.000000015 0.000000024 0.000168894 0.000000003 0.000000001 0.117054445 0.000000001 0.418377120 0.223275641 0.000000003 0.000000017 0.441170959 0.274940997 0.000007795 0.566496199 1.444513084 0.243068710 1.308694348 1.437171945 0.000000024 15.546108189 11.207969379 0.033896500 0.119979000 0.071011400 0.071079300 0.082902000 0.084170400 0.083127200 0.067885000 0.075770400 0.078978400 0.077623800 0.053949700 0.031566000 0.022458300 0.016666000 0.006877660 0.004151040 0.002933210 0.008151200 0.006823190