Protein FH

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
H14A12.2a	pdb,2fus,A,#1	41	497	0	58.734
ENSRNOP00000004917	pdb,1yfe,A,#1	48	504	0	60.48
FBpp0304212	pdb,3gtd,A,#1	10	464	0	58.079
H14A12.2a	pdb,3tv2,A,#1	42	499	0	64.27
ENSDARP00000097494	pdb,1fup,A,#1	50	505	0	61.05
ENSPFOP00000020382	pdb,2fus,A,#1	40	495	0	60.175
FBpp0070914	pdb,1fuq,A,#1	35	491	0	61.135
ENSCINP00000016516	pdb,3gtd,A,#1	10	464	0	62.281
H14A12.2a	pdb,1fuq,A,#1	41	497	0	58.952
ENSPSIP00000005663	pdb,2fus,A,#1	47	502	0	59.956
H14A12.2a	pdb,3gtd,A,#1	42	495	0	61.319

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.012	0.041	0.947	0.379	0.461	0.16

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.534391534391534	0.324514991181658	0.0229276895943563	0.00352733686067019	0	0	0.00352733686067019	0.111111111111111

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

5.623637746 1.840824587 1.604541247 0.000336005 0.000032095 4.074294090 1.918784457 0.234119724 0.014307195 4.465626621 0.241455574 0.101820984 0.138235979 0.313338855 0.039792495 0.338132132 0.226576470 0.035961461 0.205898951 4.582961963 7.090319688 0.000000023 0.000002092 0.161276889 0.100086468 0.000057625 9.688392401 0.011570022 0.000000023 0.005015318 0.002480398 0.034271528 0.072831042 0.486147177 0.376531244 10.303968594 0.000000023 0.000130317 0.107205242 0.000147002 0.232128661 0.155586806 0.409877954 0.081746760 9.139067465 0.000000023 0.000836106 0.064624391 0.000000034 0.226003428 0.248667468 0.175053433 0.639831537 0.532092144 7.863538612 0.000000023 0.064813101 0.000081560 0.064279083 0.076287517 0.183188151 0.018147676 0.067679009 0.170726632 0.016482521 13.766094949 0.000000023 0.000017568 0.165855067 0.000308934 0.201128332 0.563877640 0.000699646 0.000027912 0.311741681 0.678488107 0.000035640 13.484310628 0.000000023 0.000000001 0.000000001 0.000000001 0.000000002 1.058160278 0.000001525 0.000000002 0.000002145 1.298967556 0.000172690 0.001357789 31.874279770 0.000000251 0.000000137 0.000012740 0.000021949 2.358586485 0.058713192 19.037590837 0.000032665 0.000267711 0.001023129 17.831152179 0.000433346 43.337708067 0.001982602 0.000000696 0.115171605 3.138880028 0.008704634 1.046147114 0.361517325 0.058045259 0.001315791 4.885614215 2.569957641 0.005666617 6.428860423 47.925496159 66.028676808 0.389080095 0.000000023 0.000407408 0.072304608 0.000462413 0.257856387 0.576005304 8.681930402 0.000157084 0.638748648 19.650141973 0.000104095 0.067568614 157.756081946 0.000956151 6.552227852 82.293743841 0.000000023 0.000000001 0.000000001 0.000000004 1.026023850 0.000000001 0.942510185 2.243956029 0.000016400 0.000000027 0.000000316 4.262112251 10.512163892 0.000000044 0.003509932 0.021072462 0.025019394 0.000000023 0.000000001 0.000000005 0.000000001 0.000447080 0.000000082 0.831729318 0.000000002 0.000000002 0.759558721 0.000000002 0.019011212 11.524407810 19.769232448 0.000003235 0.004730348 0.000007098 0.000000148 0.000001106 0.000053899 0.001133776 0.000024719 0.299097772 0.099978421 9.779462440 0.003657595 0.004141678 0.091511428 0.000303543 13.052452707 41.251520487 17.781584863 0.579870835 332.707691591 49.150469627 0.059542807 368.223110305 0.004367760 0.173917000 0.115985000 0.109867000 0.137105000 0.083412600 0.114629000 0.060167400 0.055360900 0.053707500 0.042660900 0.028423700 0.012496000 0.002291050 0.000421011 0.001288810 0.000237955 0.000674157 0.002272060 0.000715972