Protein FOXRED1

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSACAP00000000103	pdb,1y56,B,#1	92	476	2.55e-28	29.534
ENSFALP00000005263	pdb,1y56,B,#1	100	464	9.2e-28	28.418
ENSTTRP00000001469	pdb,1y56,B,#1	94	459	7.77e-27	28.726
ENSPFOP00000008016	pdb,1y56,B,#1	122	477	1.2e-26	28.134
ENSOPRP00000012027	pdb,1y56,B,#1	94	459	2.71e-26	27.614
ENSONIP00000016780	pdb,1y56,B,#1	94	470	3e-26	28.947
ENSECAP00000019905	pdb,1y56,B,#1	88	460	7.25e-26	27.66
ENSAMXP00000006557	pdb,1y56,B,#1	101	477	1.29e-25	28.084
ENSTRUP00000023761	pdb,1y56,B,#1	72	441	1.83e-25	29.333
ENSOCUP00000019427	pdb,1y56,B,#1	88	459	3.76e-25	27.733
ENSSTOP00000008895	pdb,1y56,B,#1	84	459	6.68e-25	27.344

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.083	0.128	0.789	0.186	0.529	0.285

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.425816023738872	0.167655786350148	0.0029673590504451	0.00148367952522255	0.00148367952522255	0	0.00445103857566766	0.396142433234421

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.051818399 5.815538778 1.559535091 10.867327070 0.000036877 3.492380533 23.317592311 0.119827667 0.010831409 5.676671094 7.343530636 0.012258461 0.114060535 0.001927473 0.001288880 96.774563031 0.051373138 0.136753165 0.124836234 6.945525088 7.179733971 9.076679397 0.012121398 0.013677742 0.154870975 0.000453822 9.007321663 0.037125404 16.062584473 0.012246600 0.050770640 0.044709332 0.031834999 0.036681521 0.309494381 7.125995672 16.209849757 0.001570179 0.031905736 0.065891431 0.042357378 0.217450255 0.166557514 0.002533938 6.619269002 15.100058579 0.000000951 0.011776919 0.017270795 0.002235384 0.069121924 0.111820250 0.001318124 0.002309798 7.467428930 4.883185904 0.000002244 0.036808759 0.000111960 0.012464503 0.013684097 0.351079889 0.000086974 0.049471512 0.002459079 11.206023337 37.501595374 0.090698054 0.234418402 0.000042118 0.256998491 0.292812992 0.002353905 0.001150411 0.473918582 0.021946842 0.666457001 20.400729124 0.557543091 0.000006087 0.438802678 0.000000053 0.000335204 0.002017129 0.002009510 0.129180654 0.000000500 0.000000001 0.076357407 0.000000307 56.059275869 1255.178011002 0.000009013 3.649803701 0.000146351 0.006712849 0.227128677 1.478166761 1.118238493 0.026077607 0.000080622 0.034773708 0.000867069 38.333016621 6.072531845 1726.440009032 0.000003274 0.585667962 0.000225288 1.454934886 0.006185775 1.990032165 0.025058308 0.014474071 0.023461479 2.954944240 0.526497711 0.857739181 0.019995510 56.234108257 460.992698914 0.000000001 0.000000216 0.000000064 0.000140533 0.001341781 3.519502891 0.002420738 0.187297353 3.382316893 2.147247282 0.000018319 0.000216691 41.480258063 0.021089986 0.907414828 0.000032726 0.000000138 2.654138044 0.000000001 0.000000001 0.000000001 0.000000001 0.000000001 0.000000001 1.711919855 0.000000002 0.000000003 0.000000006 0.000000017 0.000002623 0.000000095 0.000000283 60.080308668 2.861443553 0.000386827 4.109529166 1.134878299 0.886282036 10.450150534 0.001419568 0.001824251 0.000281656 0.017514042 13.162390244 0.010525932 0.000015208 0.002212487 1.590549544 0.000649697 0.000000247 7441.085705123 0.000189836 0.138750521 5.826748798 2.264964330 0.993205552 14.559164803 0.534871045 2.853854780 14.104699352 1.130239868 0.012947094 0.959777541 0.000001781 0.266864594 2.946907338 16.467040924 0.000025787 0.679202020 0.000003056 0.159343000 0.098930800 0.088540800 0.095570600 0.085923100 0.082605700 0.085495000 0.091847000 0.087301400 0.061208600 0.038073100 0.015787200 0.005745890 0.000814102 0.001058150 0.000352877 0.000405601 0.000323166 0.000670970