Protein FXN

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
YDL120W	pdb,2ga5,A,#1	52	174	6.53e-88	99.187
YDL120W	pdb,3oeq,A,#1	52	172	1.75e-85	99.174
ENSCANP00000018869	pdb,3s5f,B,#1	10	134	3.97e-85	96.8
ENSECAP00000016646	pdb,3s5f,B,#1	30	153	7.16e-85	96.774
ENSECAP00000016646	pdb,3t3j,A,#1	32	153	1.46e-84	97.541
ENSPCOP00000007761	pdb,3s5f,B,#1	86	209	4.89e-84	97.581
ENSCANP00000018869	pdb,3t3j,A,#1	11	133	1.02e-83	96.748
ENSECAP00000016646	pdb,3s4m,A,#1	34	153	1.04e-83	98.333
ENSPCOP00000007761	pdb,3t3j,A,#1	88	209	1.7e-83	98.361
ENSMLUP00000014985	pdb,3s5f,B,#1	88	212	1.9e-83	94.4
ENSECAP00000016646	pdb,1ekg,A,#1	35	153	3.22e-83	98.319

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.084	0.224	0.692	0.142	0.346	0.511

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.357988165680473	0.183431952662722	0.0710059171597633	0.00591715976331361	0	0	0	0.381656804733728

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

1.302124957 0.000000239 2.167664540 0.000000010 0.011515361 4.942417421 0.000000010 0.100542465 1.309648262 3.423205847 0.000000010 0.001139820 0.677791959 0.230150749 2.078715158 0.000000010 0.098831773 0.182576433 1.589396271 2.914283358 3.072695947 0.103502516 0.033099688 0.208863249 0.174076822 0.551041564 2.582412492 1.220361827 0.000000010 0.141063881 0.057036897 0.103372165 0.046267194 1.531505695 0.162588772 2.886253457 0.000001572 0.024544046 0.018891191 0.054255687 0.078300099 0.716773035 0.037107632 2.044990162 7.093410937 0.000000010 0.000000001 0.008586496 0.017173316 0.022286904 0.015985365 0.030624903 0.001398792 0.900910131 6.767740138 0.000000010 0.000030388 0.137509807 0.000012477 0.000000032 0.159443325 0.016367736 0.172287845 0.341317401 2.758816762 4.664156803 0.000000010 0.000000004 0.000000009 0.047857274 0.138010061 0.022176863 0.482495291 0.000000013 0.000000968 0.001764520 1.228174287 5.515792560 0.000000010 0.111008252 0.060732251 0.007606587 0.000000157 0.013772697 0.000000001 0.000000001 0.131303755 0.000000938 0.121656085 0.040072802 4.919259724 0.000000010 0.051618179 0.000000001 0.000000001 0.000000001 0.146347113 0.000000001 0.000035587 0.120457700 0.326484118 0.952121154 0.910119965 0.668918830 1.934777594 0.000000010 0.000720371 1.109985185 0.031031524 1.366897575 0.455208372 0.029131806 0.767915943 0.150237064 0.672384350 3.348583948 1.455794556 4.441877085 31.050619019 0.000000023 0.000000010 0.000000001 0.000000001 0.000000001 0.000000001 0.000111607 0.157208888 0.342748768 0.000752332 0.945549968 0.159984898 0.000272858 0.000174712 0.000990038 0.000000004 30.037157301 0.000000010 0.000000001 0.000000001 0.000000001 0.000000001 0.146214750 0.000000001 0.000000001 0.000000001 0.000000002 0.070729881 0.500810995 2.653169763 13.706701899 0.000000210 0.006241912 5.057363040 0.000000010 0.036705612 0.000000001 0.000000001 0.000000001 0.000007220 0.216370328 0.000267767 0.213829923 0.001972335 0.411479437 1.109590323 0.000000004 0.231293473 0.280733870 0.001127873 13.152912646 0.000000015 0.000000010 0.000000001 0.000000002 0.041646152 0.000000001 0.001639172 0.086029928 0.003349556 0.248006559 0.758668923 0.000000002 1.252758941 1.309728732 0.396325035 0.000000004 0.022108528 1.414312148 0.000000050 13.947931452 0.010235500 0.082475400 0.093552600 0.109188000 0.121260000 0.090659800 0.115746000 0.073949500 0.067935300 0.052760300 0.047014500 0.032059400 0.022807700 0.014304900 0.023363800 0.001515180 0.007933680 0.006632100 0.014442500 0.012163900