Protein GLRX5

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSCCAP00000035308	pdb,2mmz,A,#1	35	150	1.06e-81	99.138
ENSSBOP00000039684	pdb,2mmz,A,#1	35	150	1.38e-80	97.414
ENSHGLP00000010772	pdb,2mmz,A,#1	26	146	6.22e-80	93.388
ENSOGAP00000022123	pdb,2mmz,A,#1	39	154	1.94e-79	94.828
ENSCPOP00000000798	pdb,2mmz,A,#1	28	149	1.53e-78	92.623
ENSBTAP00000017860	pdb,2mmz,A,#1	31	151	1.64e-78	90.909
ENSAMEP00000006891	pdb,2mmz,A,#1	33	150	1.89e-78	93.22
ENSPEMP00000006315	pdb,2mmz,A,#1	32	146	2.07e-78	95.652
YPL059W	pdb,3gx8,A,#1	31	141	5.13e-78	100
ENSSSCP00000002703	pdb,2mmz,A,#1	27	147	6.27e-78	90.909
ENSCHOP00000006123	pdb,2mmz,A,#1	36	149	1.09e-77	96.491

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.191	0.312	0.497	0.328	0.233	0.439

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.392982456140351	0.284210526315789	0.0140350877192982	0.0105263157894737	0.0140350877192982	0.0140350877192982	0	0.270175438596491

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

8.629215149 0.000000027 1.470375953 0.000000027 0.967205154 4.131813487 0.000000027 0.051763972 1.806635541 2.830614019 0.000000027 0.041916119 0.980906113 1.567800894 0.900183511 0.000000027 0.264371015 0.660530264 1.969015992 0.957401244 3.417276667 0.000000027 0.000004611 0.212491062 0.351468834 1.287483743 2.537702047 1.099662235 0.000000027 0.058330291 0.095799158 1.128422393 1.150236479 2.106311613 0.843664685 1.523074964 0.000000027 0.000014472 0.122459328 0.066073876 0.947079953 1.800653141 0.270071100 0.905591651 1.922973394 0.000000027 0.065486067 0.000104947 0.701821637 0.320597276 1.725195660 0.351955653 1.598767479 3.299202580 3.312565308 0.000000027 0.000000912 0.010657712 0.017319949 0.094712396 0.861501126 0.013613792 1.042248328 1.234136618 0.739457521 3.953330132 0.000000027 0.000000001 0.007316060 0.003210550 0.008180271 0.145313994 0.001315481 0.273495478 0.328026828 0.400137218 2.518175676 3.136010363 0.000000027 0.005652288 0.000000002 0.000000002 0.000005361 0.000000124 0.000000001 0.074191843 0.173947354 0.129885866 0.137024516 0.027741647 4.652761350 0.000000027 0.088154599 0.000000227 0.000000002 0.000000002 0.162682790 0.000000001 0.000000026 0.019653983 0.077177579 0.400378469 1.007526353 0.618516126 2.242060333 0.000000027 0.000000001 0.234984974 0.000000027 0.000000002 0.286630130 0.000000001 0.001300876 0.449805077 0.000000001 0.000000377 0.564311238 0.858222886 0.000007108 0.087358532 0.000000027 0.000000001 0.000000002 0.000000002 0.959596536 0.000000002 0.625726854 0.000000001 0.000174768 0.706886553 0.000000001 0.000000001 0.000000001 1.442315395 0.000001929 6.270519928 0.000000027 0.000000001 0.000000002 0.000000002 0.465732595 0.166915548 0.000000128 0.000000001 0.000041579 0.917090472 0.000000095 0.015056280 0.000000001 0.000000002 0.000000003 0.021500484 0.130127807 0.000000027 0.000000001 0.000000002 0.000000002 0.000000002 0.083434894 0.000000001 0.000000001 0.199725308 0.178742319 0.097906982 0.006125603 0.020193883 0.833873230 3.713590597 0.731417873 0.000039865 2.116768283 0.000000027 0.000000001 0.000000019 0.012070136 0.000009516 0.008145457 0.000000490 0.000239748 0.075451725 0.015654862 3.036317985 2.012540200 3.229977042 3.138696774 0.025543990 2.556432989 0.000000039 0.000002302 39.124535440 0.003642220 0.082991700 0.042793800 0.049461000 0.061358600 0.065560100 0.074430400 0.067536400 0.076158100 0.079144100 0.083917100 0.089552000 0.081585100 0.059671900 0.034115500 0.013726900 0.002595310 0.007831750 0.011946800 0.011981200