Protein GRPEL1

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSFALP00000010072	pdb,4ani,B,#1	50	198	4.99e-28	39.597
ENSFALP00000010072	pdb,4ani,A,#1	50	198	5.38e-28	39.597
FBpp0086795	pdb,4ani,A,#1	59	212	8.78e-28	39.13
FBpp0086795	pdb,4ani,B,#1	61	212	1.13e-27	39.623
ENSGALP00000025020	pdb,4ani,A,#1	70	218	1.27e-26	39.597
ENSGALP00000025020	pdb,4ani,B,#1	70	218	1.34e-26	39.597
ENSTGUP00000010443	pdb,4ani,A,#1	70	218	2.21e-26	38.926
ENSTGUP00000010443	pdb,4ani,B,#1	70	218	2.26e-26	38.926
ENSMOCP00000016823	pdb,4ani,B,#1	65	213	2.55e-26	38.255
ENSMOCP00000016823	pdb,4ani,A,#1	65	213	2.63e-26	38.255
ENSAPLP00000012952	pdb,4ani,A,#1	69	217	3.41e-26	39.597

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.218	0.217	0.565	0.259	0.356	0.385

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.375555555555556	0.102222222222222	0.0266666666666667	0.02	0.0177777777777778	0.00222222222222222	0.00222222222222222	0.453333333333333

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.265262557 1.195596117 2.901638432 20.700458623 0.002191747 7.104808041 81.591825834 0.399990372 0.018272135 9.728497865 17.735711786 0.006651813 0.018639484 0.082108173 0.669406157 11.540714273 0.119821850 0.467296798 0.231066353 6.563463587 6.153731947 113.422540659 0.174047458 0.206343395 0.567329665 1.616691311 7.037952166 0.117702813 4.839620209 0.000012052 0.092688527 0.128386201 0.074249346 0.738357118 0.753644220 7.461806635 43.647707808 0.019895716 0.007440929 0.411252779 0.070012925 0.460122507 0.239119168 0.742702588 5.791025625 9.316394379 0.001025457 0.021824436 0.000019165 0.105447476 0.431762243 0.198183397 0.012798533 0.046799748 5.801409245 2.657856446 0.000000002 0.000000002 0.000007346 0.043524388 0.169954547 0.058389287 0.002382114 0.358244605 0.198041059 3.160319238 4.108181534 0.000000002 0.013780064 0.028295084 0.097761118 0.041694805 0.162710393 0.040241747 0.017207630 0.119965514 0.070316345 4.820204114 0.008114554 0.000000002 0.089266249 0.000000002 0.000012019 0.031967647 0.188820504 0.000000217 0.021274228 0.466025786 0.000020118 0.000000003 6.269985308 0.000025016 0.000000002 0.000000002 0.000000002 0.216627201 0.000000001 0.000000001 0.000000002 0.000000001 0.190096391 0.314522543 0.000000002 0.057143203 7.712131498 0.000009209 0.000000002 0.000000002 0.000000002 0.000000002 0.000000001 0.000000001 0.000000002 0.447153097 0.001251196 0.362781667 0.606425610 0.000000001 5.284592928 78.141028174 607.734882950 0.000000399 0.000173318 0.001841682 0.009138219 4.062133510 0.010997771 2.539699167 1.577387635 1.803898436 0.762348548 0.257222931 0.013353988 0.000094771 0.000000731 0.000001339 0.000021908 0.000000002 0.000000002 0.000000002 12.113495125 0.000000001 0.000000001 0.000000007 0.000000001 0.000000002 6.812648184 0.000000009 0.389048483 22.020582686 0.000000012 0.000000042 0.000000157 0.263919842 0.000000002 0.000000002 0.000000002 0.000000516 0.000062006 0.000000437 4.028953958 0.000106773 10.536537302 0.000066294 0.000002235 2.914977098 17.771783600 41.221934416 0.000494592 0.006534573 0.000000405 0.000009209 0.000000002 0.000000002 0.000000002 0.000000002 0.000000001 0.000000001 0.000000700 0.245524533 0.762019097 0.008577672 0.644531973 0.292823438 1.745935216 12.029416097 5.649324355 0.000001030 0.000000277 24.105140513 0.000010859 0.066472100 0.063373000 0.048180100 0.048354500 0.073416100 0.077177000 0.061097000 0.081053000 0.077133500 0.107130000 0.125420000 0.115710000 0.038741300 0.008350530 0.002395490 0.000664579 0.000361091 0.000844546 0.004115870