Protein GRPEL2

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSFALP00000010072	pdb,4ani,B,#1	50	198	4.99e-28	39.597
ENSFALP00000010072	pdb,4ani,A,#1	50	198	5.38e-28	39.597
FBpp0086795	pdb,4ani,A,#1	59	212	8.78e-28	39.13
FBpp0086795	pdb,4ani,B,#1	61	212	1.13e-27	39.623
ENSTGUP00000010443	pdb,4ani,A,#1	70	218	2.21e-26	38.926
ENSTGUP00000010443	pdb,4ani,B,#1	70	218	2.26e-26	38.926
ENSMOCP00000016823	pdb,4ani,B,#1	65	213	2.55e-26	38.255
ENSMOCP00000016823	pdb,4ani,A,#1	65	213	2.63e-26	38.255
ENSAPLP00000012952	pdb,4ani,A,#1	69	217	3.41e-26	39.597
ENSAPLP00000012952	pdb,4ani,B,#1	69	217	3.44e-26	39.597
ENSXETP00000049520	pdb,4ani,B,#1	59	212	3.73e-26	36.364

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.202	0.285	0.514	0.21	0.462	0.328

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.511764705882353	0.132352941176471	0.0176470588235294	0.00294117647058824	0	0.00294117647058824	0	0.332352941176471

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.244513306 1.774266386 2.476818969 31.542810625 0.000071866 6.126611703 81.697451179 0.361626634 0.001439521 9.102201159 49.268094133 0.119459476 0.105568477 0.295250192 1.002786243 38.537733186 0.004638381 0.550996891 0.278111307 5.387796562 6.036960958 142.725357783 0.180586307 0.145330711 0.579133357 1.282868420 8.167846810 0.156698345 6.545737061 0.075592482 0.161088952 0.016917180 0.574227065 0.916520772 0.591570005 6.988260620 52.461325007 0.000938447 0.052454935 0.181792535 0.761297909 0.181480980 0.359682196 0.268115106 6.041976975 19.084753719 0.000209598 0.004109925 0.000069194 0.006548928 0.315888811 0.162565877 0.377718914 0.093697169 5.644984682 6.706081934 0.000000001 0.000000001 0.000011569 0.034672331 0.186138684 0.212859603 0.251257673 0.265932107 0.143477327 3.835582023 2.272529836 0.000000001 0.016900554 0.068091242 0.001911473 0.206174464 0.314727168 0.000258614 0.024393303 0.141722284 0.015617758 5.469522156 0.034446072 0.000000001 0.000000001 0.000000002 0.000000053 0.000000406 0.000007435 0.001724034 0.000021991 0.298521981 0.023229772 0.000000141 5.770491031 0.000029710 0.000000001 0.000000001 0.000000002 0.000000002 0.000000001 0.000000001 0.328394398 0.000041635 0.217882651 0.135167592 0.000000005 0.621751836 4.854273016 0.000029710 0.000000001 0.000000001 0.000000002 0.000000002 0.000000001 0.000000001 0.000000002 0.000000001 0.000000001 0.000000001 0.326493102 0.337484800 3.511841910 34.694368747 18.709367860 0.000000001 0.007874087 0.109095585 0.000002072 2.361803002 0.000019048 0.001309188 0.000060859 0.230945111 0.000533403 0.000000113 0.000593246 0.000000002 0.000000010 18.934046094 0.051757792 0.000000001 0.295645522 7.664655023 0.000000149 0.077305584 0.000000230 0.000003684 0.000000025 0.000725004 0.000001956 0.000000001 3.495300849 0.000000002 0.000000010 0.000000028 959.498023275 148.473054515 0.000000658 0.000000004 0.000934707 0.095174769 0.104732736 1.307881715 2.916795786 5.170523606 0.910000013 7.536152218 0.000038346 0.000429719 24.305469586 0.000019325 0.000000028 0.000006673 0.000000135 0.000045225 0.000000001 0.000000001 0.000000002 0.000000002 0.000000001 0.000000001 0.000000002 0.000000001 0.546614787 0.006369795 0.541718767 0.482892641 2.828368154 2.242346787 27.431690598 0.032853235 59.307167442 0.000084189 0.000003366 0.078631100 0.070724900 0.050936800 0.052472100 0.073169100 0.071478100 0.060667600 0.079557900 0.077718900 0.099509800 0.116921000 0.106083000 0.041196900 0.010054600 0.003544900 0.001436720 0.000742315 0.001180100 0.003970610