Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein IDStructureStartEndE valueBit score
ENSMNEP00000021310pdb,3tw2,A,#1111262.48e-8197.414
ENSMNEP00000021310pdb,4eqg,B,#1121261.29e-8097.391
ENSBTAP00000015208pdb,4njx,A,#1481632.77e-8097.414
ENSCAFP00000003255pdb,4njx,A,#1481636.16e-8096.552
ENSMOCP00000016265pdb,3tw2,A,#1111266.32e-8093.966
ENSMNEP00000021310pdb,4eqg,A,#1131267.97e-8097.368
ENSOGAP00000010584pdb,4njx,A,#1481638.2e-8096.552
ENSPEMP00000014647pdb,4njx,A,#1481638.95e-8095.69
ENSODEP00000018759pdb,4njx,A,#1481639.05e-8096.552
ENSTBEP00000011273pdb,4njx,A,#1481632.89e-7995.69
ENSMOCP00000016265pdb,4eqg,B,#1121263.07e-7993.913

Alignment variation features

Conservative sites proportionIntermediate sites proportionVariable sites proportion Conservative sites heterotachy weightIntermediate sites heterotachy weightVariable sites heterotachy weight
0.0360.2730.690.3070.2670.426

Site diversity ≤ 0.1250.125 < Site diversity ≤ 0.250.25 < Site diversity ≤ 0.375 0.375 < Site diversity ≤ 0.50.5 < Site diversity ≤ 0.6250.625 < Site diversity ≤ 0.75 0.75 < Site diversity ≤ 0.875Site diversity > 0.875
0.3464566929133860.1456692913385830.02755905511811020.07086614173228350.03543307086614170.00787401574803150.01181102362204720.354330708661417

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V



Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)