Protein HSCB

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
YGL018C	pdb,3uo3,A,#1	8	181	6.21e-129	100
ENSDORP00000008595	pdb,1fpo,A,#1	69	206	5.64e-21	37.681
ENSDORP00000008595	pdb,1fpo,B,#1	69	206	5.64e-21	37.681
ENSTGUP00000008119	pdb,1fpo,B,#1	16	133	1.39e-20	38.983
ENSTGUP00000008119	pdb,1fpo,A,#1	16	133	1.39e-20	38.983
ENSGALP00000009138	pdb,1fpo,B,#1	69	186	2.6e-20	41.525
ENSGALP00000009138	pdb,1fpo,A,#1	69	186	2.6e-20	41.525
ENSMFAP00000006526	pdb,1fpo,B,#1	72	224	2.61e-20	35.256
ENSMFAP00000006526	pdb,1fpo,A,#1	72	224	2.61e-20	35.256
ENSODEP00000023705	pdb,1fpo,B,#1	72	224	2.66e-20	33.333
ENSODEP00000023705	pdb,1fpo,A,#1	72	224	2.66e-20	33.333

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.035	0.147	0.818	0.1	0.459	0.441

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.463611859838275	0.159029649595687	0.00808625336927224	0.00269541778975741	0.00269541778975741	0.00539083557951483	0.0107816711590297	0.347708894878706

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

1.860388565 0.000079520 2.603549725 0.000042379 0.082290667 4.882521646 0.000004248 0.022103062 0.057592845 5.752084610 0.000000018 0.000041221 0.244148243 0.395983295 0.077707810 0.000185097 0.153518568 0.075016442 0.444259304 4.653698090 5.779933121 0.000000018 0.009108254 0.000068916 0.009614593 0.585011747 4.806679451 0.186311404 0.000000018 0.001734716 0.069487796 0.214795387 0.277999913 0.537976830 0.058359848 6.653236142 0.000000018 0.000000001 0.000013244 0.000424709 0.065868095 0.123373323 0.374414032 0.044916835 5.788696499 0.000000018 0.002903473 0.000000034 0.046726057 0.033990317 0.086574219 0.162261302 0.080814468 0.070763684 5.295856300 0.000000018 0.057048164 0.000000546 0.001840116 0.000116143 0.119072146 0.001398962 0.199143409 0.080952844 0.000631714 5.223128352 0.000000018 0.000000003 0.016532895 0.069725758 0.295486415 0.014088866 0.000115333 0.000356291 0.208086371 0.068699118 0.000213854 5.936759925 0.000000018 0.000000146 0.000042430 0.000862808 0.012390161 1.192179485 0.096411963 0.278160856 0.235104121 0.072519950 0.491356968 0.000303661 14.604829667 0.000000018 0.000000001 0.012516127 0.000001363 0.000000105 0.000001799 0.000000150 0.000000195 0.000001334 0.000000023 0.132252561 1.517895070 0.000008883 6.217455875 0.000000018 0.000000001 0.001965650 1.624142994 0.002508068 0.000198517 0.001635632 0.000003119 0.000002547 0.000000207 0.000818288 0.017854257 0.065620720 33.912435026 107.101909564 0.000000018 0.000000001 0.000007849 0.000000608 0.000000937 1.461586819 0.000009532 0.878549503 0.018670628 0.000002211 0.000072206 0.000132423 0.000022576 28.615315778 64.579776887 29.280338527 0.000000018 0.000000001 0.000000730 0.064478384 0.017711778 0.000000437 0.000029772 0.016009430 0.000000001 0.000000001 0.000000001 0.000000001 0.000000002 0.000000319 0.704184366 6.828513705 0.000029879 0.000000018 0.000000001 0.000068959 0.000001028 0.005473657 0.000092410 0.000002884 1.001227308 0.000029255 1.121637208 0.000113836 0.491800002 0.514923050 4.525980084 22.859713896 1.123181559 0.013600623 48.765979679 0.000000018 0.184731000 0.406176013 0.000015342 0.519362978 0.000003484 0.000039526 0.669255547 0.000011527 0.616698532 0.000012769 0.000001072 0.806223177 7.216284915 20.860825493 10.032126527 0.029957147 53.354576079 136.825488727 0.005680910 0.072535200 0.069944800 0.070157000 0.080656500 0.094648500 0.107301000 0.079197700 0.078082000 0.089386300 0.094185700 0.072036600 0.049142100 0.010504200 0.007556700 0.005132830 0.001297470 0.003674980 0.002936200 0.005942950