Protein MCAT

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSMOCP00000001707	pdb,2c2n,A,#1	58	372	0	81.905
ENSLAFP00000017133	pdb,2c2n,A,#1	39	353	0	86.032
ENSCAFP00000001310	pdb,2c2n,A,#1	62	377	0	85.759
ENSSBOP00000026279	pdb,2c2n,A,#1	1	299	0	90.301
ENSMICP00000014095	pdb,2c2n,A,#1	59	374	0	86.709
ENSOPRP00000015413	pdb,2c2n,A,#1	51	368	0	76.803
ENSRNOP00000013994	pdb,2c2n,A,#1	58	372	0	83.175
ENSOCUP00000021054	pdb,2c2n,A,#1	58	373	0	86.076
ENSJJAP00000020199	pdb,2c2n,A,#1	57	371	0	84.127
ENSANAP00000000261	pdb,2c2n,A,#1	60	374	0	91.139
ENSNGAP00000019540	pdb,2c2n,A,#1	56	371	0	83.228

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.273	0.416	0.31	0.445	0.323	0.232

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.593984962406015	0.0827067669172932	0.0413533834586466	0.0037593984962406	0.0037593984962406	0.0018796992481203	0.0056390977443609	0.266917293233083

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.613582448 0.087580936 1.921659961 0.000284091 0.521980958 3.754075162 0.000000002 0.369426433 1.310233349 4.301375269 0.000767661 0.172263513 0.267190877 0.667065435 1.442191589 0.432837158 0.359897742 0.582286591 1.175265029 3.808022597 4.708169039 0.040033224 0.095400318 0.550462138 0.295608991 0.729536890 4.847881276 1.363509219 0.000599272 0.046186345 0.427142087 0.403374493 0.585983883 0.950899006 1.570161284 5.483840939 0.000000842 0.226951613 0.194237635 0.337025738 0.398907652 1.200139425 0.598720879 1.418175341 4.942130556 0.000626506 0.020292165 0.176758700 0.185837228 0.174248509 0.237287993 0.454769623 0.613594986 1.001497483 4.544731285 0.018240273 0.123582101 0.156181871 0.021128943 0.028846810 0.736128366 0.605441440 0.269363036 1.193827166 1.512090457 6.251808625 0.000003521 0.017486161 0.166948706 0.022516906 0.146720280 0.164554244 0.464483294 0.552898928 0.040713004 0.660621211 0.346205340 7.025174083 0.000000002 0.123849919 0.019914618 0.335961895 0.079887787 0.549820064 0.000106204 0.147135622 0.126525684 0.263644166 0.919743280 1.632537857 8.601835790 0.128218342 0.148589149 0.000000007 0.000000122 0.009750524 0.124139142 0.524635419 0.000543085 0.265977487 0.947586677 0.586400341 0.743180349 2.128480017 6.446944548 0.000000002 0.081184807 0.000026679 0.349731142 0.000000077 0.202602155 0.000632671 0.000000089 0.000000099 1.334437709 0.382047634 0.754073031 0.882031546 2.331109676 0.000000210 0.000000002 0.000000001 0.000000001 0.000000001 0.000000022 0.000000002 0.091110828 0.000000002 0.595422421 0.000043490 0.080995179 1.739025884 0.000000002 0.000000004 0.000000009 0.000000013 0.000000002 0.000000001 0.001818094 0.000000001 0.000000002 0.000000013 0.000000002 0.000000002 0.000000001 0.000051759 0.015878677 2.545377645 1.785152848 2.824291319 0.001066610 0.117369579 0.000000021 0.287978871 0.186508496 0.000000187 0.000008041 0.512344130 0.004814882 0.100598781 0.000000181 0.578944485 0.091000204 1.119368647 1.291416321 0.421468862 0.001839409 0.000000062 0.000000013 0.000000021 13.654671932 0.000000002 0.000022754 0.557668054 0.332164624 0.114994009 0.004026032 0.690927482 0.628843741 0.000008837 0.463438458 1.088214069 0.106061324 7.851827174 1.369637080 11.645412912 3.390097518 0.000000021 11.589800132 10.335500448 0.053576500 0.156076000 0.084444500 0.072473100 0.059761200 0.059243200 0.062777500 0.055860300 0.071186100 0.073405000 0.083281500 0.058635700 0.043523500 0.028496600 0.010743200 0.007642730 0.004770840 0.002494150 0.006833970 0.004774060