Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein IDStructureStartEndE valueBit score
ENSCCAP00000022957pdb,4al0,A,#181521.64e-10397.241
ENSCCAP00000022957pdb,4al1,A,#1101528.04e-10297.203
ENSCCAP00000022957pdb,4wab,A,#1101513.87e-10197.183
ENSCCAP00000022957pdb,4bpm,A,#1101528e-10196.503
ENSMICP00000025330pdb,4al0,A,#181524.44e-9991.724
ENSMICP00000025330pdb,4al1,A,#1101524.53e-9892.308
ENSJJAP00000021896pdb,4al0,A,#1111543.88e-9791.667
ENSMICP00000025330pdb,4wab,A,#1101524.39e-9791.608
ENSMICP00000025330pdb,4bpm,A,#1101527.28e-9791.608
ENSTSYP00000014439pdb,4al0,A,#1131561.29e-9690.972
ENSJJAP00000021896pdb,4al1,A,#1151541.35e-9693.571

Alignment variation features

Conservative sites proportionIntermediate sites proportionVariable sites proportion Conservative sites heterotachy weightIntermediate sites heterotachy weightVariable sites heterotachy weight
0.0610.3040.6340.0190.1520.829

Site diversity ≤ 0.1250.125 < Site diversity ≤ 0.250.25 < Site diversity ≤ 0.375 0.375 < Site diversity ≤ 0.50.5 < Site diversity ≤ 0.6250.625 < Site diversity ≤ 0.75 0.75 < Site diversity ≤ 0.875Site diversity > 0.875
0.4416058394160580.1131386861313870.01094890510948910.003649635036496350.00364963503649635000.427007299270073

Loading ...

Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V



Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)