Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein IDStructureStartEndE valueBit score
FBpp0308283pdb,4p60,A,#1862387.4e-1026.708
ENSAMXP00000006875pdb,4p60,A,#11393153.53e-0827.322
ENSACAP00000002786pdb,4p60,A,#11693947.92e-0827.615
ENSONIP00000019957pdb,4p60,A,#11453151.75e-0728.409
ENSCAPP00000012454pdb,4p60,A,#1912623.15e-0729.944
ENSCINP00000009142pdb,4p60,A,#11594089.97e-0725.758

Alignment variation features

Conservative sites proportionIntermediate sites proportionVariable sites proportion Conservative sites heterotachy weightIntermediate sites heterotachy weightVariable sites heterotachy weight
0.0380.0620.9010.0110.3140.675

Site diversity ≤ 0.1250.125 < Site diversity ≤ 0.250.25 < Site diversity ≤ 0.375 0.375 < Site diversity ≤ 0.50.5 < Site diversity ≤ 0.6250.625 < Site diversity ≤ 0.75 0.75 < Site diversity ≤ 0.875Site diversity > 0.875
0.1210191082802550.1197452229299360.04394904458598730.04394904458598730.03821656050955410.02292993630573250.01210191082802550.598089171974522

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V



Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)