Protein MIPEP

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSMFAP00000032777	pdb,2o36,A,#1	120	694	1.59e-53	27.273
ENSMFAP00000032777	pdb,1s4b,P,#1	120	694	2.28e-53	27.273
ENSPVAP00000001355	pdb,2o36,A,#1	120	692	8.19e-53	26.437
ENSPVAP00000001355	pdb,1s4b,P,#1	120	692	1.2e-52	26.437
ENSFCAP00000009124	pdb,2o36,A,#1	120	694	1.43e-52	25.865
ENSFCAP00000009124	pdb,1s4b,P,#1	120	694	1.82e-52	25.865
ENSMPUP00000000632	pdb,2o36,A,#1	276	850	2.26e-52	26.656
ENSBTAP00000011704	pdb,2o36,A,#1	119	693	2.32e-52	26.29
ENSBTAP00000011704	pdb,1s4b,P,#1	119	693	2.53e-52	26.29
ENSMPUP00000000632	pdb,1s4b,P,#1	276	850	3.25e-52	26.656
ENSOCUP00000020397	pdb,2o36,A,#1	120	694	5.51e-52	26.316

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.06	0.118	0.822	0.112	0.553	0.335

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.432411067193676	0.112252964426877	0.0181818181818182	0.00395256916996047	0.00474308300395257	0.00158102766798419	0.00237154150197628	0.424505928853755

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.381358404 2.476131120 2.202102754 19.415000265 0.000076347 5.895982462 222.820240810 0.294630341 0.053207706 6.116563769 60.258314327 0.000898524 0.314231052 0.105528768 0.034122354 165.996393147 0.166371644 0.052238391 0.347692434 6.099683482 7.250389634 65.870153291 0.000081482 0.007964438 0.062249349 0.183046489 6.918714471 0.009038484 45.809844587 0.008066980 0.011327352 0.005141494 0.313636004 0.181726347 0.418844424 6.852064034 41.819073887 0.018998230 0.015043961 0.003631036 0.163885262 0.133343147 0.299610403 0.000105617 5.923108071 41.071182305 0.013695165 0.000737661 0.000879130 0.076405143 0.421557931 0.108927687 0.110936857 0.015955009 5.809669948 7.791545112 0.005288054 0.042211206 0.000000056 0.001183541 0.738621947 0.112989789 0.267861847 0.057493400 0.021748643 7.745960734 29.346417016 0.002963584 0.024130800 0.001673020 0.251187933 0.004639778 0.243249099 0.163159459 0.255613937 0.281972563 0.004306210 12.043970045 1.046316236 0.000000001 0.000000001 0.000228934 0.524028684 0.000051582 0.413444480 0.000000001 0.386473442 0.000001313 0.000000415 0.000000011 47.186255421 2.187657137 0.000209724 3.040232678 0.000053890 0.000000011 5.083135098 0.000001922 0.106599745 0.752269426 5.292809751 1.290594015 0.000000003 0.000000006 0.000000033 3547.912799024 0.000747755 0.030315210 0.187928120 10.211572700 0.781437338 0.936336433 15.552954580 5.125255479 0.239569849 0.152862814 0.105860239 6.103914063 204.611508953 0.189457429 5089.396912958 153.942127878 0.874706340 0.005604603 7.528763600 0.297396333 4.119239850 0.066280456 1.849532417 16.504518256 2.225698596 1.754460711 4.555845650 0.000019581 0.940027587 20.238129683 0.010725932 0.000000001 0.000000001 0.000001552 2.837072206 0.000000007 0.000012037 0.000000001 0.000000001 0.000005943 8.855503184 0.000000003 0.000000006 52.912618179 0.043530970 0.000525595 0.000005420 0.000053042 0.000000001 0.000000001 0.736361182 0.000000001 1.330161573 0.000000001 0.000000103 0.000000001 0.000000001 0.000000001 0.000000003 0.000000006 14.454297676 706.325872274 0.000000381 0.000005420 702.405656752 0.081161619 0.000000001 0.000000001 0.000001159 0.000012036 0.000876271 0.000049795 0.000007250 0.000000289 1.315738660 0.000000006 0.000000003 0.000000006 0.000000033 1.995548643 0.000300298 0.000005420 599.803015682 752.705456842 0.000001885 0.140102000 0.094241800 0.085198000 0.101100000 0.088993700 0.102927000 0.077065100 0.083225900 0.087522700 0.076356700 0.039713400 0.018078400 0.003052580 0.000181967 0.000262672 0.000018450 0.000351297 0.001045110 0.000560229