Protein MRPL22

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSGACP00000027534	pdb,1bxe,A,#1	78	180	4.29e-12	36.893
ENSGACP00000027534	pdb,4wwt,W,#1	78	180	4.94e-12	36.893
ENSGACP00000027534	pdb,4wwe,W,#1	78	180	5e-12	36.893
ENSONIP00000020702	pdb,1bxe,A,#1	75	177	7.58e-10	34.951
ENSONIP00000020702	pdb,4wwt,W,#1	75	177	8.89e-10	34.951
ENSONIP00000020702	pdb,4wwe,W,#1	75	177	1.01e-09	34.951
ENSLAFP00000008267	pdb,4wwt,W,#1	46	148	1.05e-09	33.01
ENSLAFP00000008267	pdb,4wwe,W,#1	46	148	1.07e-09	33.01
ENSLAFP00000008267	pdb,1bxe,A,#1	46	148	1.13e-09	33.01
ENSTRUP00000000958	pdb,1bxe,A,#1	69	171	1.24e-09	34.951
ENSNGAP00000001251	pdb,4wwt,W,#1	72	174	1.29e-09	33.981

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.033	0.079	0.887	0.118	0.537	0.345

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.401734104046243	0.173410404624277	0.0202312138728324	0.00867052023121387	0	0.00289017341040462	0.00578034682080925	0.38728323699422

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.489722381 13.719232592 2.076542605 50.795676301 0.000440509 4.773920359 70.298177847 0.398902057 0.059785560 5.345646402 81.984854204 0.160764936 0.234975883 0.036975277 0.009349350 184.750608321 0.291893242 0.196575712 0.481969126 6.430226707 5.766413941 25.530223332 0.000540206 0.001178509 0.135476926 0.056203404 6.810011737 0.068680451 13.301799668 0.108406464 0.041766415 0.330209459 0.065039161 0.063874103 0.069031553 7.640676915 44.322093107 0.015514006 0.099082089 0.119385281 0.072091973 0.194467532 0.529270811 0.000025854 4.554081845 45.987247336 0.022846131 0.012772995 0.000332039 0.000166137 0.049647876 0.230282793 0.084542007 0.007577362 5.291275486 4.809529163 0.000000001 0.253803097 0.006803687 0.034373879 0.091263205 0.001976691 0.574867048 0.350310652 0.000025387 5.541047562 0.000121060 0.000000001 0.000000001 0.000000001 0.000000001 0.165878882 0.001549229 0.000000001 0.002478528 0.004740225 0.002777303 10.635696643 0.000080306 0.000156754 0.000000001 0.000000001 0.000000001 0.001731899 0.395130056 0.000000001 0.046378018 0.000000001 0.097876683 0.000211461 14.112401633 0.000080306 0.226009794 0.000000001 0.413667552 0.000000001 0.096549715 0.000000001 0.000000001 0.000000001 0.090635077 0.000000001 0.329788674 0.000000096 11.601433328 0.000080306 0.000000001 1.110588915 0.002434417 0.000000001 1.316625956 0.000000001 0.000000001 0.000000001 0.000000001 0.000000001 0.000000002 0.000000003 0.000000004 86.556071831 0.000080306 0.000000001 0.000000001 0.000000001 0.000000001 0.537206696 0.000000001 0.000000001 0.000000001 0.000000001 2.289207608 0.095164761 0.000000003 0.000000004 0.000000012 0.000000121 6.593970592 0.000000001 0.401410908 0.392524865 6.173055832 1.796053675 0.017142936 0.000000001 0.000000001 1.729923835 0.000016368 0.000000002 0.000016302 0.000000004 0.000000012 0.000000121 14.798263049 0.000080306 0.945705191 0.000000001 0.000000001 0.000000001 0.000000001 0.000000001 0.000000001 0.000000001 0.949925053 0.000001635 0.000042609 7.024324617 2.189468979 0.000000012 0.000000121 0.000000063 0.000000103 0.019626655 0.000000001 0.000000044 0.000333942 0.018632663 0.000000193 0.000004634 0.000000001 0.000000001 0.000000001 0.415921471 0.060369225 3.123603937 0.000000004 6.774238494 0.000000121 79.993416805 156.003837323 0.000000117 0.000001245 0.102100000 0.081663700 0.088437200 0.077501000 0.094569000 0.093647900 0.082586400 0.083002900 0.095267200 0.076333400 0.054655000 0.029583200 0.026400100 0.008038350 0.000829720 0.001579780 0.000972553 0.000853847 0.001977220