Protein MRPL40

There are no sufficient 3D structure homologs in Scratch-1D dataset for the Protein family MRPL40!

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.175	0.152	0.672	0.01	0.341	0.648

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.476340694006309	0.145110410094637	0.00630914826498423	0.00315457413249211	0.00315457413249211	0.00630914826498423	0.00315457413249211	0.356466876971609

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

13.294888049 2.870090225 3.132346893 19.703885148 0.930957451 8.809078225 5.607349327 0.295714921 0.562330767 4.738780666 8.157580532 0.134813658 0.314837050 0.063396938 0.063898820 14.018291257 0.106529945 0.072705653 1.124970881 4.041457758 5.441509969 27.838283625 0.017261384 0.323204151 0.424059512 0.554598571 5.062853648 0.288068113 15.480155751 0.023965962 0.019528608 0.399764975 0.016362387 0.444068772 0.504139425 5.912603882 4.434050131 0.209615308 0.184569863 0.091985081 0.255554173 0.082255789 0.268759474 0.286095395 5.669763798 11.303159735 0.000884271 0.143191549 0.015930574 0.097092659 0.096238411 0.071619593 0.038222165 0.012517193 4.167864987 0.248251088 0.000000070 0.000006552 0.014134109 0.000078036 0.010421949 0.210904238 0.156125985 0.164008944 0.000091326 2.659426398 1.031100881 0.000000002 0.000000037 0.037554162 0.050299675 0.196125180 0.037772187 0.167563141 0.233740611 0.000318888 0.010022323 4.443875955 7.773496962 0.016301179 0.000005267 0.107731492 0.000001550 0.221141768 0.000717129 0.004493422 0.005794555 0.000001487 0.000000030 0.000000077 5.926364742 88.835686414 0.000008923 0.024278822 0.001714944 0.000000128 0.000011561 0.000016058 0.000001998 0.905968103 0.811200045 0.233348127 0.000030564 5.032437335 18.228431966 2622.858737173 1.464341864 0.006608210 0.003803534 0.001829951 1.127164480 0.027682536 1.143140413 1.226939320 0.002289642 0.003356531 0.000003838 0.000064232 2.403882942 69.444949446 1607.669362350 0.000247587 0.040041291 10.400280063 1.369551590 0.000134037 0.000333458 0.000125687 0.008210780 0.002140053 1.840016736 0.000045222 0.000581379 0.695841601 396.117396432 642.103894195 3.477964739 0.000000239 0.000007187 0.000037407 0.023519411 0.000024625 3.368809694 0.000065232 0.022375709 0.000000433 0.000000875 0.000000244 0.068217780 0.040027708 133.023573450 0.599192550 0.065866331 0.251153564 0.000001793 0.333788251 0.000023697 0.000001471 0.000000249 0.000002117 0.416016080 0.000000173 0.000000043 0.072729032 0.000000002 0.000000002 0.000000045 0.000005475 0.164139144 0.000242634 57.994361203 102.369493236 0.805950817 0.000025599 0.000019974 0.010374122 0.000000208 0.000009846 0.000003541 1.090691221 1.035087060 2.009434681 0.000116417 0.000001103 1.185443175 7.443653535 42.671088418 16.090347234 0.000087289 60.539141030 0.000002437 0.060297600 0.068876900 0.077268400 0.087578300 0.094497300 0.107527000 0.073882000 0.090879800 0.082546100 0.082694900 0.074466300 0.051823000 0.030894100 0.004290420 0.001768530 0.001025820 0.001500320 0.004399220 0.003781280