Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein IDStructureStartEndE valueBit score
ENSFALP00000000895pdb,4iyl,A,#1671471.83e-1441.975
ENSACAP00000018742pdb,4iyl,A,#1831632.06e-1439.506
ENSAPLP00000007821pdb,4iyl,A,#11031833.71e-1440.741
ENSDARP00000139233pdb,4iyl,A,#11212015.05e-1439.506
ENSLOCP00000003739pdb,4iyl,A,#1711517.14e-1439.506
ENSLOCP00000003739pdb,1a32,A,#1711511.55e-1337.037
ENSFALP00000000895pdb,1a32,A,#1701471.63e-1341.026
ENSMGAP00000003275pdb,4iyl,A,#11041813.5e-1338.462
ENSGALP00000059172pdb,4iyl,A,#1891664.46e-1338.462
ENSACAP00000018742pdb,1a32,A,#1831635.87e-1338.272
ENSPSIP00000010963pdb,4iyl,A,#1551232.85e-1242.029

Alignment variation features

Conservative sites proportionIntermediate sites proportionVariable sites proportion Conservative sites heterotachy weightIntermediate sites heterotachy weightVariable sites heterotachy weight
0.0280.0680.9040.0260.4450.529

Site diversity ≤ 0.1250.125 < Site diversity ≤ 0.250.25 < Site diversity ≤ 0.375 0.375 < Site diversity ≤ 0.50.5 < Site diversity ≤ 0.6250.625 < Site diversity ≤ 0.75 0.75 < Site diversity ≤ 0.875Site diversity > 0.875
0.3835616438356160.2821917808219180.02465753424657530.01095890410958900.008219178082191780.005479452054794520.284931506849315

Loading ...

Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V



Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)