Protein MTIF2

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSGMOP00000000230	pdb,4b3x,A,#1	25	361	6.08e-81	43.149
ENSXMAP00000004465	pdb,4b3x,A,#1	113	383	9.08e-81	49.815
ENSTRUP00000031892	pdb,4b3x,A,#1	12	344	3.03e-80	42.136
ENSTNIP00000009221	pdb,4b3x,A,#1	71	344	5.42e-80	48.175
ENSGACP00000026326	pdb,4b3x,A,#1	116	383	6.64e-80	49.254
ENSXETP00000061279	pdb,4b3x,A,#1	122	449	1.56e-78	42.683
ENSAMXP00000013489	pdb,4b3x,A,#1	156	427	1.71e-77	48.897
ENSONIP00000009126	pdb,4b3x,A,#1	163	427	3.14e-77	48.302
ENSLOCP00000019150	pdb,4b3x,A,#1	175	439	3.7e-77	49.434
ENSCINP00000000257	pdb,4b3x,A,#1	1	268	8.08e-77	47.761
ENSDORP00000005889	pdb,4b3x,A,#1	175	442	1.13e-76	49.254

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.065	0.096	0.839	0.184	0.534	0.282

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.577480490523969	0.225195094760312	0.00445930880713489	0	0.00334448160535117	0.00334448160535117	0.00222965440356745	0.183946488294314

Loading ...

Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

1.060562788 0.000000029 2.942465026 0.214483415 0.032618115 5.720706114 0.000000029 0.084183622 0.116108915 9.644235586 0.368318833 0.015147650 0.100546551 0.168017601 0.045811762 0.001148698 0.207280967 0.232244148 0.253703777 9.234539213 9.208746322 0.001476975 0.000000007 0.023190265 0.008038232 0.135338036 8.121852403 0.186253832 0.000000029 0.017089412 0.002414317 0.032560805 0.107658078 0.334254749 0.230207575 5.806165549 0.000000029 0.002074617 0.019154812 0.020436993 0.104789770 0.346851109 0.091589461 0.032269817 5.055285942 0.000000029 0.003799613 0.017432919 0.000051167 0.115959410 0.310375807 0.010652098 0.109227051 0.059932640 4.798462598 0.000000029 0.041160380 0.004664668 0.044843542 0.004997246 0.111593641 0.191267891 0.012039967 0.171209768 0.010825163 5.159462817 0.000000029 0.000047018 0.000038687 0.000000472 0.000365180 0.089252088 0.015521828 0.004384970 0.087344508 0.004253943 0.087702658 9.230639934 0.000000029 0.000000001 0.045966192 0.058667253 0.000179667 0.224401534 0.238798085 0.009348704 0.000000010 0.124780402 0.089995450 0.000288136 11.694387356 0.000000029 0.000000001 0.146933034 0.000000002 0.006316074 0.000000001 0.608989906 0.150931137 0.217157472 0.355883028 0.000000088 0.073743865 1.920238794 12.403766862 0.000000029 0.000000001 0.000000002 0.000000002 0.325948169 0.000000001 0.000319409 0.061158398 0.090381741 0.147651806 0.216995803 0.001078079 1.020297514 0.145484990 0.000000028 0.000000029 0.000883619 0.000000002 0.322932245 0.469146328 0.000493588 0.144764558 0.000000001 0.000000001 0.121900324 0.170917066 0.000365998 0.640844588 0.000000006 17.064302885 11.892544507 0.000000029 0.000001683 0.092318369 0.000000002 0.000000002 0.000000001 0.000000001 0.000000001 0.176934426 0.121228561 0.223111961 0.000000828 0.795825993 0.000000006 0.000000028 0.000000023 35.143183712 0.000000029 0.234570672 0.000000002 0.000000002 0.000000007 0.000000001 0.327908080 0.000000001 0.000000001 0.000000001 0.456777413 0.000128301 1.290487375 0.000000006 0.000000028 0.000000023 0.000000034 31.997090779 0.000000029 0.000000001 0.000000002 0.000000002 0.120771361 0.000000001 0.075887391 0.061993039 0.000000001 0.000000001 0.039855327 0.301674130 0.088899002 0.779899156 1.518351793 0.000000023 1.574449333 0.000000064 0.000000132 0.003403410 0.116729000 0.063836700 0.055497400 0.066272500 0.075355100 0.074011900 0.078033600 0.103028000 0.117601000 0.097806500 0.074367000 0.040872000 0.015885900 0.003560960 0.004265580 0.002904660 0.001567430 0.000759163 0.004242020