Protein MTPAP

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSRROP00000040045	pdb,2e5g,A,#1	55	141	4.19e-49	96.552
ENSOGAP00000000740	pdb,2e5g,A,#1	55	141	1.35e-48	94.253
ENSSTOP00000002563	pdb,2e5g,A,#1	55	141	1.49e-48	95.402
ENSOCUP00000014792	pdb,2e5g,A,#1	90	176	1.87e-48	95.402
ENSMICP00000008958	pdb,2e5g,A,#1	92	178	3.07e-48	94.253
ENSFCAP00000008212	pdb,2e5g,A,#1	88	174	6.06e-48	93.103
ENSTTRP00000002305	pdb,2e5g,A,#1	55	141	9.57e-48	95.402
ENSVPAP00000005029	pdb,2e5g,A,#1	55	141	9.7e-48	93.103
ENSJJAP00000022216	pdb,2e5g,A,#1	55	141	1.11e-47	94.253
ENSECAP00000007491	pdb,2e5g,A,#1	55	141	1.29e-47	95.402
ENSAMEP00000007096	pdb,2e5g,A,#1	55	141	1.76e-47	91.954

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.027	0.045	0.928	0.014	0.277	0.709

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.0449678800856531	0.0955032119914347	0.0700214132762313	0.0494646680942184	0.0385438972162741	0.0308351177730193	0.0334047109207709	0.637259100642398

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.805270936 0.000000613 2.059222016 0.000002624 0.001548222 6.434773628 0.000000613 0.041760005 0.017880590 5.555858351 0.000000613 0.001069664 0.031161769 0.050084555 0.188652699 0.000000613 0.102323681 0.049768226 0.596978430 4.958343565 5.964473054 0.000000613 0.000007446 0.006764520 0.029841829 0.078449216 6.298178393 0.378588527 0.000000613 0.004824912 0.007742082 0.019253455 0.060928720 1.040502048 0.111057680 5.453265364 0.000000613 0.000001454 0.013140387 0.000653210 0.016250340 0.160502598 0.175096573 0.157451966 5.298947488 0.000000613 0.000292918 0.001518256 0.012593570 0.042740345 0.139630545 0.030410019 0.048293520 0.220161619 4.357253689 0.000000613 0.000231296 0.005206749 0.000121476 0.013884767 0.045771278 0.080779454 0.094360643 0.085738227 0.171026503 4.936074619 0.000000613 0.005245143 0.007303955 0.000216305 0.077239085 0.021993226 0.040550110 0.119840400 0.046443722 0.081366877 0.272479418 7.894231227 0.000000613 0.018941001 0.008769950 0.000456853 0.288991147 0.001280327 0.007544006 0.010774710 0.040800042 0.018923270 0.017324663 0.033168217 15.862118434 0.000000613 0.000194797 0.012573802 0.221865504 0.061617121 0.093495817 0.000343155 0.412091793 0.141342592 0.117877035 0.009090296 0.086783176 0.137057883 45.128642088 0.000000613 0.729725780 0.047588320 0.013949805 0.614075047 0.014457013 0.008978868 0.358343917 0.002711994 0.004985919 0.004079270 0.276740953 0.097895004 3.597140363 168.437651747 0.000000613 0.149316260 0.000007346 0.000004105 0.000217848 0.026363570 0.004662013 0.051098816 0.169945148 0.586665770 0.056091785 0.074425704 0.005569035 0.000771460 2.601090325 123.091941746 0.000000613 0.011243600 0.000000002 0.000000002 0.043414274 0.123742761 0.011694137 0.431998887 0.036609699 0.000005668 0.000600700 0.046206091 1.461922853 1.054341411 5.395155113 47.326951865 87.523605520 0.000000613 0.000337796 0.035516020 0.000120158 0.009598964 0.000041216 0.010564209 0.000053902 0.005843762 0.146297143 0.203975302 0.057005375 1.947358354 0.179611788 0.055855865 0.000259252 0.000000169 39.053003467 0.000000613 0.048119448 0.049684811 0.002591442 0.163649348 0.001293045 0.024790023 0.111396443 0.184488949 0.293214045 0.110187423 0.209450197 0.669201875 2.153663910 7.625965548 0.016579332 19.169457627 11.725533079 76.243518399 0.000163083 0.070487300 0.050350800 0.053574800 0.084296700 0.087274600 0.094617500 0.086215500 0.105557000 0.111495000 0.114180000 0.081922100 0.041824300 0.012029500 0.001997570 0.000489647 0.000591493 0.000844058 0.000980082 0.001108820