Protein NUBPL

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSDARP00000129550	pdb,1g3q,A,#1	61	308	4.67e-14	28.458
ENSDARP00000129550	pdb,1g3r,A,#1	61	308	4.67e-14	28.458
FBpp0306285	pdb,1hyq,A,#1	42	272	8.55e-14	26.556
ENSCINP00000002485	pdb,1g3r,A,#1	66	311	4.85e-13	28.125
ENSCINP00000002485	pdb,1g3q,A,#1	66	311	4.85e-13	28.125
ENSPFOP00000017812	pdb,1g3q,A,#1	61	308	8.67e-13	27.381
ENSPFOP00000017812	pdb,1g3r,A,#1	61	308	8.67e-13	27.381
ENSTRUP00000027390	pdb,1g3q,A,#1	61	308	1.13e-12	26.877
ENSTRUP00000027390	pdb,1g3r,A,#1	61	308	1.13e-12	26.877
ENSGACP00000018972	pdb,1g3q,A,#1	8	255	1.48e-12	26.482
ENSGACP00000018972	pdb,1g3r,A,#1	8	255	1.48e-12	26.482

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.016	0.039	0.945	0.059	0.035	0.906

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.328629032258065	0.280241935483871	0.0423387096774194	0.0221774193548387	0.00201612903225806	0	0	0.324596774193548

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.004644493 0.142331004 1.889433216 10.864784981 0.000075946 5.021361969 42.836760386 0.018401264 0.078869248 6.233768165 10.106770786 0.023778007 0.101282025 0.204804301 0.269969602 36.608221278 0.132855339 0.090272426 0.334834961 4.875964361 6.271883687 30.165520261 0.000101509 0.000280086 0.079406669 0.096841300 9.093531386 0.244877192 1.291193052 0.029376690 0.058191312 0.038409621 0.037734172 0.616704840 0.313110984 9.246259848 13.926946304 0.000683611 0.053780189 0.055833794 0.226692872 0.043854440 0.296768878 0.028918499 8.976911577 7.689941433 0.000018290 0.103317039 0.029742274 0.013874214 0.313997753 0.077978761 0.034344286 0.051279728 7.051173684 39.529274389 0.005775005 0.002285342 0.015874666 0.074491614 0.033337435 0.067722100 0.095506308 0.201763228 0.138956722 7.739723307 73.289788173 0.000000001 0.000000032 0.000021750 0.006422117 0.034140736 0.174127489 0.135327469 0.003263868 0.057404557 0.227827935 11.642542363 10.511558321 0.024735186 0.085966271 0.227344832 0.015764780 0.000027944 0.001890138 0.200643435 0.494681031 0.116306654 0.005323353 0.000361191 18.044837046 884.394898648 0.000425096 0.206868364 0.016076302 0.030218239 0.000790921 0.172872702 0.111352265 0.010944221 0.001129551 0.000240367 0.020814523 1.453758137 35.765371596 66.760568520 0.225428245 0.020058868 0.004332496 0.017045493 0.000000543 0.003371430 0.000000597 0.000013657 1.310066498 0.367906755 0.934494617 1.461326839 1.626659909 142.650266154 21.758579795 0.000000001 0.000000001 0.000002027 0.000001442 0.000001990 0.000000347 2.614608672 0.002459318 0.000054830 0.000035626 2.699916299 0.348101717 0.000001410 79.353190152 0.019763647 0.005133536 1.862710486 0.000000001 0.000000001 0.000000002 0.000000001 0.000000001 0.000000037 0.000000003 0.000001785 0.000336495 7.517673041 1.934322303 10.215974185 0.018652595 6.205593836 530.295915353 284.342717437 0.000000001 0.000749277 2.010467194 0.932338574 2.457258087 0.179511484 0.000799510 0.000110746 0.001921623 0.018132036 1.999818479 6.622002677 11.668232034 12.750605316 4.391325284 64.375538068 0.000831518 57.963473152 0.000000001 0.119818341 0.000239612 0.007990241 0.000392923 0.000273940 0.000005680 0.000000005 0.000075699 0.033795482 0.630788908 4.046099345 0.007250363 0.125002772 25.008091900 95.989956904 0.000002030 539.769481372 0.000002740 0.151257000 0.097743800 0.080690200 0.095400000 0.075575700 0.110457000 0.059897300 0.064881000 0.061400700 0.070489600 0.059497400 0.039293400 0.021507200 0.004328320 0.002014360 0.000792186 0.000386237 0.000777204 0.003609070