Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein IDStructureStartEndE valueBit score
ENSXETP00000047526pdb,2ozl,A,#13275131.01e-0727.979
ENSXETP00000047526pdb,3exe,G,#13275133.48e-0727.461
ENSXETP00000047526pdb,3exe,C,#13275133.48e-0727.461
ENSXETP00000047526pdb,3exe,A,#13275133.49e-0727.461
ENSXETP00000047526pdb,3exe,E,#13275133.75e-0727.461
ENSXETP00000047526pdb,3exf,E,#13275133.92e-0727.461
ENSXETP00000047526pdb,3exf,C,#13275133.92e-0727.461
ENSXETP00000047526pdb,3exf,G,#13275134.01e-0727.461
ENSXETP00000047526pdb,3exf,A,#13275134.01e-0727.461
ENSXETP00000047526pdb,3exh,G,#13275136e-0727.461
ENSXETP00000047526pdb,3exh,C,#13275136e-0727.461

Alignment variation features

Conservative sites proportionIntermediate sites proportionVariable sites proportion Conservative sites heterotachy weightIntermediate sites heterotachy weightVariable sites heterotachy weight
0.0360.1180.8470.0480.5410.411

Site diversity ≤ 0.1250.125 < Site diversity ≤ 0.250.25 < Site diversity ≤ 0.375 0.375 < Site diversity ≤ 0.50.5 < Site diversity ≤ 0.6250.625 < Site diversity ≤ 0.75 0.75 < Site diversity ≤ 0.875Site diversity > 0.875
0.3921921921921920.1789789789789790.04264264264264260.007207207207207210.00420420420420420.0030030030030030.00240240240240240.369369369369369

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V



Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)