Protein OMA1

There are no sufficient 3D structure homologs in Scratch-1D dataset for the Protein family OMA1!

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.038	0.081	0.881	0.055	0.484	0.461

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.478932584269663	0.231741573033708	0.023876404494382	0	0.00280898876404494	0	0.00280898876404494	0.259831460674157

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.003180907 1.346737840 1.804627725 33.872223465 0.000000613 4.345996426 65.266642005 0.082307117 0.007995311 4.243809060 47.734897885 0.000003040 0.142284929 0.376256210 0.151225791 103.570353229 0.196151277 0.073576603 0.742575743 5.302032831 6.701847946 107.936030006 0.000001079 0.004504487 0.310453970 0.193191004 8.884850903 0.319549636 25.271631596 0.001413711 0.056868142 0.210071115 0.180089585 0.276561288 0.056089073 8.094070667 30.478441527 0.003211303 0.029975596 0.066007501 0.003951826 0.081146584 0.663045286 0.006585874 6.320807156 79.203300012 0.002661154 0.076441075 0.030497224 0.063336279 0.489761578 0.073759401 0.181087918 0.253109575 7.975913129 7.550304537 0.000000295 0.000048485 0.020342621 0.001842865 0.005740269 0.015826027 0.214581504 0.534745294 0.024432759 9.045990343 24.832676657 0.000000001 0.000954528 0.000006731 0.174795129 0.213355174 0.258895175 0.000842580 0.404316243 0.501529105 0.281061487 11.821504626 1.150539392 0.016364081 0.000000001 0.000000001 0.077675502 0.000000008 0.000000518 0.267573410 0.002310297 0.041290073 0.000182940 0.000000002 22.942074484 7.864627243 0.067676020 0.000000098 0.000001481 0.143683122 0.000000018 0.853576491 0.000000001 0.000000002 0.000280690 0.000137373 1.737335192 2.861947266 57.441355673 0.035259631 0.000000017 0.000000004 0.000003223 0.000061922 0.000000004 0.002085966 0.000000001 0.000000002 0.956334168 0.000358196 0.000000674 0.873462604 0.019907063 499.666822112 0.000021507 0.000000001 0.000000001 1.192294204 0.000000001 0.000000001 0.000000001 0.000000001 0.000000002 0.000003397 0.018854147 9.763265630 0.000753216 0.000000011 0.015324947 498.741653349 0.000021507 0.632610320 0.000000003 0.059553824 0.000000001 0.000000001 0.000000001 0.000000001 0.000000002 0.000001006 1.977354803 0.007239374 1.680861804 0.000000011 8.677064663 179.226048849 1890.662347154 2.158729203 0.152561517 0.008963337 0.000046593 0.000012359 0.643864505 0.104769302 1.234104457 0.004044766 0.000000280 0.333608353 0.000287651 1.948312301 0.231288802 2.138434570 84.914290783 0.000013217 0.000001090 0.001945990 0.307867398 0.232851021 0.000000001 0.000000001 0.000035623 0.000000001 0.207377398 0.357323224 0.000001444 1.580098466 0.000000002 0.853099415 0.000000310 29.428035262 0.000002968 0.000000605 130.408440320 0.000377808 0.000004650 0.151219000 0.104082000 0.102650000 0.116537000 0.080705800 0.097982900 0.069016200 0.062966800 0.068634900 0.059147200 0.047851100 0.024367500 0.009356830 0.001779830 0.000698933 0.000404984 0.000367569 0.000860721 0.001365810