Protein PGAM5

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSLACP00000020137	pdb,3f2i,E,#1	104	165	1.92e-08	42.188
ENSLACP00000020137	pdb,3f2i,D,#1	104	165	2.05e-08	42.188
ENSLACP00000020137	pdb,3f2i,F,#1	105	165	2.16e-08	42.857

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.122	0.198	0.68	0.204	0.524	0.272

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.332258064516129	0.112903225806452	0.0258064516129032	0.00645161290322581	0.0129032258064516	0.00483870967741936	0.0129032258064516	0.491935483870968

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.051326113 0.764705555 1.499083511 57.064226304 0.040010998 5.029766841 20.288996130 0.025064961 0.000284750 5.845160006 51.799025931 0.000024223 0.024459666 0.099341519 0.000240230 97.659342614 0.189291004 0.006030750 0.012257764 6.851462265 5.887121564 82.506782903 0.005613835 0.092436083 0.130687769 0.000499386 6.281718172 0.080177542 35.625083396 0.088191216 0.004116625 0.514947834 0.225818634 0.120306361 0.433651426 7.953427272 94.157252146 0.000000385 0.000000318 0.173121567 0.080234819 0.314426397 0.597559885 0.074594792 7.161135931 2.927506338 0.039291444 0.000000001 0.000083760 0.000000003 0.216080712 0.006434041 0.003346583 0.117413051 6.504489367 0.234223080 0.004503175 0.000000001 0.019126480 0.000000029 0.030461337 0.245404985 0.000000846 0.000020685 0.005372692 7.677117494 13.263688120 0.000000162 0.016486430 0.113586839 0.201401892 0.272500858 0.057421602 0.000831064 0.002511650 0.010199325 0.020951215 7.489734634 0.000055598 0.000000001 0.270935144 0.000000002 0.000000001 0.000000004 0.000000001 0.097043161 0.064135525 0.034620861 0.000000779 0.000000001 13.533964793 0.332242694 0.000000001 0.000000004 0.000000002 0.000000001 0.001779819 0.000000007 4.232680644 3.257846830 0.837789544 0.000099139 0.000000001 1.807424036 130.856706470 5.741449095 0.000000001 0.000000001 0.000000012 0.040278517 0.002454469 4.021806521 6.023933389 0.000001006 0.000000001 0.000000001 0.000000001 0.000000002 0.000000007 0.000000136 0.000055598 0.062335142 2.430079109 0.363342039 0.000000001 0.000000001 0.000000001 0.000000001 0.000000001 0.000000001 0.000000001 0.000000001 0.000000002 10.415440156 0.000001876 0.000000271 0.003978078 0.000000001 0.000000001 0.000000002 0.001056847 0.000129076 0.003372411 0.035405208 0.000000001 0.000000001 0.000000001 0.000000001 0.000000002 0.000000007 0.000000136 2328.473888171 0.000000065 0.000055598 0.000000001 0.000000001 0.000000002 0.000000001 0.000000001 0.800821146 0.000000001 1.030217142 0.000000001 1.593273570 0.000000001 0.000000002 0.000000007 0.000000136 0.000000271 26.518250015 0.000000080 0.000055598 1.494647701 0.036172572 0.080562585 0.000000001 0.000287308 0.000000001 0.000000001 0.000000001 0.000000001 0.000000001 0.000000001 0.000000002 0.000000046 0.000000136 0.000001667 154.871516538 72.876530791 94.840162352 0.000001799 0.136390000 0.072950300 0.059272800 0.075198400 0.089136600 0.102905000 0.076504000 0.087251800 0.083441600 0.077818400 0.074327600 0.043655500 0.014404000 0.000737727 0.000368492 0.001547670 0.001252620 0.001372330 0.001463150