Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein IDStructureStartEndE valueBit score
FBpp0078330pdb,1tza,A,#12924055.04e-1735.965
ENSCINP00000016033pdb,2f1e,A,#12553661.1e-1637.168
FBpp0078330pdb,2f1e,A,#12934052.09e-1637.168
ENSLACP00000004355pdb,1tza,A,#12413562.73e-1635.345
ENSCSAVP00000011862pdb,2f1e,A,#12593723.75e-1639.316
ENSDARP00000072478pdb,1tza,A,#12483636.66e-1634.483
ENSAMXP00000009121pdb,1tza,A,#12503657.6e-1634.483
ENSONIP00000013674pdb,1tza,A,#12493649.21e-1634.483
ENSPFOP00000011387pdb,1tza,A,#12493641.04e-1534.483
ENSORLP00000012315pdb,1tza,A,#12473621.18e-1534.483
ENSTNIP00000017301pdb,1tza,A,#12493641.6e-1533.621

Alignment variation features

Conservative sites proportionIntermediate sites proportionVariable sites proportion Conservative sites heterotachy weightIntermediate sites heterotachy weightVariable sites heterotachy weight
0.0840.140.7760.240.4550.305

Site diversity ≤ 0.1250.125 < Site diversity ≤ 0.250.25 < Site diversity ≤ 0.375 0.375 < Site diversity ≤ 0.50.5 < Site diversity ≤ 0.6250.625 < Site diversity ≤ 0.75 0.75 < Site diversity ≤ 0.875Site diversity > 0.875
0.4514991181657850.1887125220458550.0176366843033510.01058201058201060.007054673721340390.005291005291005290.008818342151675480.310405643738977

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V



Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)