Protein PTGES2

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSSSCP00000006036	pdb,2pbj,A,#1	97	370	0	90.511
ENSCAFP00000029770	pdb,2pbj,D,#1	99	372	0	93.066
ENSCAFP00000029770	pdb,1z9h,D,#1	99	372	0	93.066
ENSP00000345341	pdb,2pbj,A,#1	100	373	0	98.905
ENSECAP00000014368	pdb,2pbj,A,#1	8	281	0	91.241
ENSJJAP00000014231	pdb,2pbj,A,#1	44	317	0	92.701
ENSNGAP00000019692	pdb,1z9h,B,#1	96	369	0	89.051
ENSNGAP00000019692	pdb,1z9h,A,#1	96	369	0	89.051
ENSTTRP00000015618	pdb,2pbj,A,#1	97	370	0	91.606
ENSP00000345341	pdb,2pbj,D,#1	100	373	0	98.905
ENSJJAP00000014231	pdb,1z9h,A,#1	44	317	0	92.701

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.059	0.365	0.575	0.047	0.48	0.473

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.602484472049689	0.132505175983437	0.0455486542443064	0.0062111801242236	0.0020703933747412	0.0082815734989648	0.0124223602484472	0.19047619047619

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.143060035 0.001196840 1.585866369 0.104527933 0.257538335 4.554846442 0.060171609 0.168257387 0.825642946 5.089904741 0.061473571 0.324392560 0.354105368 0.810192576 1.792383331 0.036427974 0.321077277 0.696587266 1.487948172 3.909450732 4.370440815 0.000007427 0.018357497 0.366265169 0.513530765 1.164713167 6.183288629 1.836770702 0.000000092 0.078005730 0.044289738 0.339804459 0.156533024 2.719843578 0.561973162 8.591264280 0.000000003 0.001803101 0.215520599 0.066118150 0.559240023 0.697016319 0.301832367 1.910162235 6.637720253 0.000000003 0.028266774 0.004401588 0.009256497 0.051453705 0.272568748 0.809527978 0.443148699 1.420318648 9.178571250 0.000000003 0.016500667 0.002743591 0.178670049 0.025753455 0.018288128 0.243328487 0.687218969 0.889248999 0.841795768 8.961946046 0.000000003 0.039358159 0.000110986 0.083873537 0.038768147 0.039329941 0.293182754 0.311051166 0.417370326 0.635075682 0.416813622 9.749718138 0.000000003 0.019059621 0.011705268 0.019186770 0.138569980 0.142383498 0.405897165 0.000879735 1.504832059 0.409133745 2.080265814 0.756049039 11.598084034 0.000000003 0.000000017 0.240694132 0.002846303 0.000014323 0.001412302 0.114211543 0.479301142 0.468199464 0.000647842 0.002289036 0.000403013 0.027152140 14.157461542 0.000000003 0.020630501 0.000000015 0.000000002 0.000000111 0.000000078 0.044923550 0.128166267 0.011736429 0.068191118 0.267803769 0.232622276 0.090322796 0.638717832 0.544781250 0.000000003 0.000255532 0.092113458 0.000007232 0.110341623 0.001870707 0.128503647 0.000051968 0.000002454 0.000184586 0.000021822 0.625985113 1.942417890 0.000000210 2.755187845 1.748261997 0.000000003 0.000000001 0.000000001 0.000000001 0.000000001 0.062910170 0.175041135 0.000000002 0.080459932 0.212472514 0.002157114 0.000000002 0.000000003 0.025122562 2.107827166 1.155023494 0.070043316 0.000000003 0.058020706 0.000000229 0.000000125 0.287915674 0.000033664 0.000033560 0.000033542 1.163893582 0.529863261 3.425530634 0.206900420 0.000002298 1.028735563 0.000008304 0.617982725 15.525248147 19.833106751 0.000000003 0.000000003 0.000000014 0.000000711 0.023807965 0.000084271 0.000004021 0.361115484 0.252716436 0.935395299 0.070614185 0.069707780 1.345786908 2.595869076 0.000002316 0.771904339 0.000156722 0.000000108 13.574651882 0.035254500 0.184298000 0.100125000 0.086007700 0.075744400 0.063827200 0.073113100 0.052085000 0.064579100 0.060165900 0.054835300 0.053483700 0.032965100 0.016693600 0.008348360 0.010917700 0.007429060 0.007671970 0.004343360 0.008112010