Protein REXO2

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSXMAP00000009503	pdb,2igi,A,#1	5	180	7.51e-61	49.432
ENSXMAP00000009503	pdb,2igi,B,#1	5	180	7.77e-61	49.432
ENSTRUP00000020600	pdb,2igi,A,#1	27	206	6.13e-59	47.778
ENSPPAP00000033987	pdb,2igi,B,#1	43	216	7.72e-59	50
ENSPPAP00000033987	pdb,2igi,A,#1	43	216	7.97e-59	50
ENSONIP00000002446	pdb,2igi,A,#1	41	214	1.14e-58	50
ENSONIP00000002446	pdb,2igi,B,#1	41	214	1.17e-58	50
FBpp0083854	pdb,2igi,A,#1	35	211	1.2e-58	45.763
ENSTRUP00000020600	pdb,2igi,B,#1	33	206	1.25e-58	48.851
FBpp0083854	pdb,2igi,B,#1	35	211	1.32e-58	45.763
ENSPFOP00000017956	pdb,2igi,A,#1	82	261	1.33e-58	48.333

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.062	0.14	0.798	0.24	0.448	0.312

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.472622478386167	0.14985590778098	0.0518731988472622	0.00576368876080692	0.00576368876080692	0.0172910662824208	0.0230547550432277	0.273775216138329

Loading ...

Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.000510120 16.843060042 2.079982308 51.223507809 0.000002022 6.418672618 3.403510907 0.042656306 0.014771872 5.655902506 29.628556259 0.000012383 0.100012444 0.196361462 0.304188841 124.100703509 0.447928661 0.038615080 0.254355484 4.468513143 7.740432072 42.536336888 0.000000001 0.084626142 0.757246264 0.001530022 6.980372824 0.106048144 7.193487014 0.000000419 0.157132664 0.228525178 0.000627633 0.130686478 0.005544875 7.222616879 26.130702181 0.048468424 0.014584416 0.603333180 0.389345804 0.017030918 1.045097883 0.619993270 6.605995293 9.596754568 0.001305843 0.000002302 0.024347298 0.000673670 0.217951015 0.269151453 0.002824132 0.237387334 5.496107895 37.063791425 0.000000001 0.149116087 0.075078409 0.000001322 0.099161252 0.293951133 0.332023843 0.173480245 0.031286410 4.685458558 3.674040972 0.000000001 0.010209867 0.000038964 0.000000097 0.152290060 0.002189920 0.000009741 0.505464111 0.492480704 0.090179576 8.188233871 3.831323835 0.047927762 0.169364165 0.000003877 0.308831909 0.000000182 0.029544239 0.000000118 0.489236363 0.000000049 0.137744973 0.003649965 11.136943536 0.000055307 0.000000001 0.000000001 0.000000002 0.000000001 0.000000001 0.000000001 0.000000001 0.000000001 0.000000001 0.000000001 0.832361770 2.607300736 16.647150163 0.046226107 0.000000001 0.002296141 0.000000084 0.000114783 0.000000001 0.000028366 0.000000001 0.000054864 0.000000017 0.000000044 0.635044344 0.011111299 5.543788619 33.730477601 598.856245299 0.000000001 6.072642376 0.001147274 0.000000234 0.426540812 1.096537826 3.111636925 0.000101313 0.000021001 0.000000022 0.000016175 0.000029639 1.481238491 0.000000014 82.489589496 3.231499712 0.000000001 0.000003832 5.161701541 0.000000001 0.000104272 6.371510964 0.000000001 0.000000001 4.824249319 1.318123180 0.001422971 10.518995050 0.418274506 22.067640488 120.930516998 0.000847391 0.000055307 0.000000001 0.000000001 0.000000002 1.194003655 0.000000001 0.000000001 0.000000001 0.000000001 0.075539724 0.000005284 8.436682015 3.319474824 0.000118475 0.000000014 0.000000028 0.000000086 0.000000062 0.000055307 0.000000001 0.000000001 0.000000002 0.000000001 0.353240203 0.000000001 0.000000001 0.000000001 0.000000001 0.368316429 0.000000725 1.337909708 6.980802176 0.000000564 24.447901971 0.000000086 0.000000062 27.296417587 0.000001808 0.133392000 0.087593500 0.054362500 0.074412000 0.089860100 0.083017200 0.074889200 0.073214100 0.082102100 0.077671800 0.066130500 0.054358900 0.031170200 0.006906810 0.003515680 0.001162000 0.001613120 0.001505410 0.003120740